Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.94□□□□□ -1.62
CLPTM1O96005 AC000123.3-201ENST00000624029 4975 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLPTM1O96005 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLPTM1O96005 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.94□□□□□ -1.62
CLPTM1O96005 AL159987.1-201ENST00000347911 293 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 RNA5SP394-201ENST00000364216 119 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLPTM1O96005 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLPTM1O96005 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLPTM1O96005 RPS6P23-201ENST00000413224 722 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.94□□□□□ -1.62
CLPTM1O96005 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.94□□□□□ -1.62
CLPTM1O96005 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.94□□□□□ -1.62
CLPTM1O96005 AC007161.1-204ENST00000423039 460 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 HSFY1P1-201ENST00000423928 1178 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.94□□□□□ -1.62
CLPTM1O96005 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.94□□□□□ -1.62
CLPTM1O96005 SUMO2P3-201ENST00000438311 288 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.94□□□□□ -1.62
CLPTM1O96005 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLPTM1O96005 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 SETP20-201ENST00000457046 852 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AL445433.1-201ENST00000457507 257 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 RPS23P6-201ENST00000466136 431 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AC022215.1-201ENST00000481770 362 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AC008410.1-201ENST00000483777 339 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 RN7SL570P-201ENST00000484405 292 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 NIP7P2-201ENST00000485801 544 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 PPIAP19-201ENST00000486414 492 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AC073610.1-201ENST00000489971 396 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AC009120.1-201ENST00000493458 473 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 CAB39P1-201ENST00000502277 460 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 DUTP7-201ENST00000507982 486 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.94□□□□□ -1.62
CLPTM1O96005 TCP11X3P-202ENST00000514289 1254 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.94□□□□□ -1.62
CLPTM1O96005 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.94□□□□□ -1.62
CLPTM1O96005 AC021678.3-201ENST00000517893 476 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AC112191.2-201ENST00000522428 333 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.94□□□□□ -1.62
CLPTM1O96005 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.94□□□□□ -1.62
CLPTM1O96005 OR7E10P-201ENST00000526420 991 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.94□□□□□ -1.62
CLPTM1O96005 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.94□□□□□ -1.62
CLPTM1O96005 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.94□□□□□ -1.62
CLPTM1O96005 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.94□□□□□ -1.62
CLPTM1O96005 AC027281.1-201ENST00000574178 758 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AP001496.3-201ENST00000580230 913 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AL391001.1-201ENST00000602747 715 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.94□□□□□ -1.62
CLPTM1O96005 BNIP3P19-201ENST00000605397 577 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AC097505.1-201ENST00000610199 565 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AC074276.2-201ENST00000619891 348 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AC127024.6-201ENST00000621598 424 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 AC087565.3-203ENST00000641018 837 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.94□□□□□ -1.62
CLPTM1O96005 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CLPTM1O96005 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLPTM1O96005 AL450326.2-201ENST00000421913 1962 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLPTM1O96005 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.94□□□□□ -1.62
CLPTM1O96005 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLPTM1O96005 DDX18P3-201ENST00000404856 2007 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CLPTM1O96005 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLPTM1O96005 AC087565.3-202ENST00000642085 1603 ntBASIC4.94□□□□□ -1.62
CLPTM1O96005 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CLPTM1O96005 SALL4P2-201ENST00000423288 2910 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.93□□□□□ -1.62
CLPTM1O96005 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CLPTM1O96005 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CLPTM1O96005 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 SNORA64.1-201ENST00000362600 132 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 RN7SKP153-201ENST00000365026 316 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CLPTM1O96005 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CLPTM1O96005 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.93□□□□□ -1.62
CLPTM1O96005 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.93□□□□□ -1.62
CLPTM1O96005 UBE2V1P6-201ENST00000430840 422 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.93□□□□□ -1.62
CLPTM1O96005 MTND6P18-201ENST00000439477 513 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 AL161636.2-201ENST00000445179 927 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.93□□□□□ -1.62
CLPTM1O96005 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
CLPTM1O96005 RPS6P2-201ENST00000454208 705 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 AP000547.1-201ENST00000454360 617 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLPTM1O96005 MTND2P30-201ENST00000456663 382 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 HSPE1P22-201ENST00000456856 327 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.93□□□□□ -1.62
CLPTM1O96005 RPS17P15-201ENST00000475609 349 ntBASIC4.93□□□□□ -1.62
CLPTM1O96005 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms