Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 MIR4489-201ENST00000578869 62 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS4BO75351 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS4BO75351 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS4BO75351 AL136295.6-201ENST00000610486 658 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS4BO75351 AC015712.7-201ENST00000615211 635 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
VPS4BO75351 AL121890.3-201ENST00000618494 516 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 AL121895.2-201ENST00000619558 447 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 AL357562.1-201ENST00000624911 609 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS4BO75351 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS4BO75351 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS4BO75351 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS4BO75351 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS4BO75351 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
VPS4BO75351 CASC19-260ENST00000641828 2001 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS4BO75351 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS4BO75351 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VPS4BO75351 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS4BO75351 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS4BO75351 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VPS4BO75351 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS4BO75351 RNU4-68P-201ENST00000364314 141 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 AL132875.1-201ENST00000403623 949 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS4BO75351 MTND4P3-201ENST00000417829 541 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 AL513175.2-201ENST00000422071 443 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 AL365338.1-201ENST00000422282 858 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 TXNL1P1-201ENST00000429528 554 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 AC138761.5-201ENST00000433967 325 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 AC023141.3-201ENST00000436698 278 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS4BO75351 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS4BO75351 RPS7P3-201ENST00000443360 580 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 TRY2P-201ENST00000448860 689 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS4BO75351 AC023245.1-201ENST00000468501 517 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 RPS26P39-201ENST00000469206 341 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 RPS4XP6-201ENST00000477670 797 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 OR11I1P-201ENST00000486033 954 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS4BO75351 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS4BO75351 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS4BO75351 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS4BO75351 RNA5SP303-201ENST00000516192 130 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 RNA5SP438-201ENST00000516561 112 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.7□□□□□ -1.5
VPS4BO75351 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS4BO75351 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS4BO75351 NDUFS5P6-201ENST00000529136 295 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 MTCO2P15-201ENST00000532655 656 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 AC135279.1-201ENST00000543493 504 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 MTCYBP27-201ENST00000555160 670 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS4BO75351 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS4BO75351 AC040904.1-201ENST00000590850 223 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS4BO75351 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS4BO75351 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.7□□□□□ -1.5
VPS4BO75351 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS4BO75351 AL138478.1-201ENST00000612252 832 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS4BO75351 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS4BO75351 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS4BO75351 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS4BO75351 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS4BO75351 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS4BO75351 AC139713.2-210ENST00000641741 992 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS4BO75351 AC087516.1-201ENST00000561236 2428 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS4BO75351 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS4BO75351 GNL2P1-201ENST00000451274 2190 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS4BO75351 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
VPS4BO75351 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS4BO75351 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS4BO75351 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS4BO75351 NLRP3P1-201ENST00000622303 1785 ntBASIC5.7□□□□□ -1.5
VPS4BO75351 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS4BO75351 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS4BO75351 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS4BO75351 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS4BO75351 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS4BO75351 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
VPS4BO75351 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS4BO75351 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS4BO75351 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS4BO75351 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VPS4BO75351 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS4BO75351 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
VPS4BO75351 AC073429.2-201ENST00000569694 1444 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS4BO75351 RNA5SP273-201ENST00000362484 113 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 RNU4-51P-201ENST00000364206 140 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 RN7SKP292-201ENST00000365522 317 ntBASIC5.69□□□□□ -1.5
VPS4BO75351 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms