Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC026368.1-201ENST00000614934 690 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.95□□□□□ -1.62
PDLIM1O00151 AP003499.2-201ENST00000624100 483 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 BMS1P21-201ENST00000634565 365 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 MIR4302-201ENST00000638058 60 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.95□□□□□ -1.62
PDLIM1O00151 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDLIM1O00151 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.95□□□□□ -1.62
PDLIM1O00151 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDLIM1O00151 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
PDLIM1O00151 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDLIM1O00151 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
PDLIM1O00151 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM1O00151 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM1O00151 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.94□□□□□ -1.62
PDLIM1O00151 Z98755.1-201ENST00000407015 1384 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM1O00151 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.94□□□□□ -1.62
PDLIM1O00151 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM1O00151 RNU6-386P-201ENST00000362650 107 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM1O00151 AC019155.1-201ENST00000382242 574 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 MIR143-201ENST00000385300 106 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 RNU6-1320P-201ENST00000390838 107 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 RNU6-1269P-201ENST00000391139 107 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AC092642.1-201ENST00000392417 425 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM1O00151 OR6E1P-201ENST00000414424 923 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.94□□□□□ -1.62
PDLIM1O00151 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM1O00151 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 AL133173.1-201ENST00000423458 397 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 TNPO1P1-201ENST00000423641 1138 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 PTMAP3-201ENST00000447474 330 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM1O00151 AP000547.1-201ENST00000454360 617 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AL035090.1-201ENST00000454835 332 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM1O00151 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 RNU6-599P-201ENST00000459383 107 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 RNU6-1193P-201ENST00000459461 107 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 RPSAP39-201ENST00000467439 883 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AC092754.1-201ENST00000472975 479 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 MTND3P6-201ENST00000485242 339 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AC022133.1-201ENST00000490961 571 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 RN7SL466P-201ENST00000497546 295 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AC106872.4-201ENST00000510050 523 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 VWA8P1-201ENST00000510889 176 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.94□□□□□ -1.62
PDLIM1O00151 AC022360.1-201ENST00000521058 340 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AC090281.1-201ENST00000523019 276 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.94□□□□□ -1.62
PDLIM1O00151 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 AL121839.1-201ENST00000556233 1185 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM1O00151 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM1O00151 PPATP2-201ENST00000605635 508 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AL159169.2-201ENST00000610061 1269 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM1O00151 AC109583.2-201ENST00000617367 129 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 RNU6-368P-201ENST00000620928 107 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 RNU6-538P-201ENST00000622329 107 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AL691477.1-201ENST00000624398 162 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 AC017104.4-201ENST00000636283 1592 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM1O00151 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM1O00151 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.94□□□□□ -1.62
PDLIM1O00151 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PDLIM1O00151 AL133243.3-201ENST00000617415 3004 ntBASIC4.94□□□□□ -1.62
PDLIM1O00151 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM1O00151 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM1O00151 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM1O00151 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM1O00151 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM1O00151 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PDLIM1O00151 MIR323A-201ENST00000362199 86 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 RNU4-23P-201ENST00000362839 140 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM1O00151 RPL23AP48-201ENST00000406913 488 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.93□□□□□ -1.62
PDLIM1O00151 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM1O00151 RAB9AP5-201ENST00000437794 597 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 AC069285.2-201ENST00000440210 275 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 RAB9AP2-201ENST00000443911 597 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.93□□□□□ -1.62
PDLIM1O00151 VDAC2P4-201ENST00000452925 711 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 CCDC75P1-201ENST00000469247 791 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PDLIM1O00151 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM1O00151 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms