Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.56□□□□□ -1.52
RAD9AQ99638 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.56□□□□□ -1.52
RAD9AQ99638 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.56□□□□□ -1.52
RAD9AQ99638 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAD9AQ99638 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAD9AQ99638 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RAD9AQ99638 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RAD9AQ99638 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
RAD9AQ99638 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.55□□□□□ -1.52
RAD9AQ99638 AC004076.2-201ENST00000620532 3323 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AC104964.3-201ENST00000606115 2860 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 BCORP1-203ENST00000513194 5093 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RAD9AQ99638 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RAD9AQ99638 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.55□□□□□ -1.52
RAD9AQ99638 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RAD9AQ99638 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 AC109446.4-201ENST00000623235 2755 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RAD9AQ99638 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 RNU6-1331P-201ENST00000363658 106 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.55□□□□□ -1.52
RAD9AQ99638 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RAD9AQ99638 NPM1P37-201ENST00000403105 874 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
RAD9AQ99638 Z85994.2-201ENST00000434327 452 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AL161722.2-201ENST00000434731 981 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AL137845.2-201ENST00000444292 988 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.55□□□□□ -1.52
RAD9AQ99638 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.55□□□□□ -1.52
RAD9AQ99638 RPS23P7-201ENST00000466210 444 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AC006967.1-201ENST00000467608 589 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AC090602.1-201ENST00000469695 252 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AC093827.1-201ENST00000480094 861 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.55□□□□□ -1.52
RAD9AQ99638 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.55□□□□□ -1.52
RAD9AQ99638 SCARNA20.4-201ENST00000516969 131 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AC034205.1-201ENST00000520621 638 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.55□□□□□ -1.52
RAD9AQ99638 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.55□□□□□ -1.52
RAD9AQ99638 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.55□□□□□ -1.52
RAD9AQ99638 AC009268.1-201ENST00000561352 1203 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.55□□□□□ -1.52
RAD9AQ99638 MIR5096-201ENST00000583713 70 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 SS18L2P2-201ENST00000583960 235 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.55□□□□□ -1.52
RAD9AQ99638 AC022387.2-201ENST00000604050 448 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AC012467.1-201ENST00000607740 256 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AP001521.2-201ENST00000608772 546 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AC019193.2-201ENST00000610012 634 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 AC244107.2-201ENST00000611773 76 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 MIR6758-201ENST00000620653 63 ntBASIC5.55□□□□□ -1.52
RAD9AQ99638 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.55□□□□□ -1.52
RAD9AQ99638 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.55□□□□□ -1.52
RAD9AQ99638 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
RAD9AQ99638 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RAD9AQ99638 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAD9AQ99638 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
RAD9AQ99638 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD9AQ99638 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.54□□□□□ -1.52
RAD9AQ99638 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD9AQ99638 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAD9AQ99638 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD9AQ99638 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.54□□□□□ -1.52
RAD9AQ99638 MTCO1P15-201ENST00000529569 1526 ntBASIC5.54□□□□□ -1.52
RAD9AQ99638 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RAD9AQ99638 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.54□□□□□ -1.52
RAD9AQ99638 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
RAD9AQ99638 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAD9AQ99638 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RAD9AQ99638 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD9AQ99638 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD9AQ99638 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RAD9AQ99638 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAD9AQ99638 U3.23-201ENST00000391132 200 ntBASIC5.54□□□□□ -1.52
RAD9AQ99638 RNA5SP113-201ENST00000410486 84 ntBASIC5.54□□□□□ -1.52
RAD9AQ99638 SNORA79B-201ENST00000410557 148 ntBASIC5.54□□□□□ -1.52
RAD9AQ99638 AC002524.1-201ENST00000411687 547 ntBASIC5.54□□□□□ -1.52
RAD9AQ99638 FAM204CP-201ENST00000424489 642 ntBASIC5.54□□□□□ -1.52
RAD9AQ99638 AC099670.2-201ENST00000435130 321 ntBASIC5.54□□□□□ -1.52
RAD9AQ99638 LINC02210-201ENST00000444561 288 ntBASIC5.54□□□□□ -1.52
RAD9AQ99638 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.54□□□□□ -1.52
RAD9AQ99638 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.54□□□□□ -1.52
RAD9AQ99638 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RAD9AQ99638 AC098583.1-201ENST00000480875 255 ntBASIC5.54□□□□□ -1.52
RAD9AQ99638 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.54□□□□□ -1.52
RAD9AQ99638 AC091912.1-201ENST00000511351 248 ntBASIC5.54□□□□□ -1.52
RAD9AQ99638 AC006427.1-201ENST00000514359 712 ntBASIC5.54□□□□□ -1.52
RAD9AQ99638 RNA5SP43-201ENST00000516559 110 ntBASIC5.54□□□□□ -1.52
RAD9AQ99638 AP000859.1-201ENST00000525536 307 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms