Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 RPS26P2-201ENST00000440331 348 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 RPS29P9-201ENST00000440360 171 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 OTX2P1-201ENST00000450956 354 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 OR52E7P-201ENST00000452394 933 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 RN7SL517P-201ENST00000462240 305 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AC007998.1-201ENST00000474156 672 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AC015864.1-201ENST00000496512 544 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AC018442.3-201ENST00000523025 183 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AC124856.1-201ENST00000600819 896 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 VN1R81P-201ENST00000602085 372 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AC104687.2-201ENST00000604442 342 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 SNORD91B-202ENST00000608459 222 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
NUDCD3Q8IVD9 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.9□□□□□ -1.62
NUDCD3Q8IVD9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.9□□□□□ -1.62
NUDCD3Q8IVD9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
NUDCD3Q8IVD9 CUL4AP1-201ENST00000514750 1863 ntBASIC4.9□□□□□ -1.62
NUDCD3Q8IVD9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
NUDCD3Q8IVD9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
NUDCD3Q8IVD9 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.9□□□□□ -1.62
NUDCD3Q8IVD9 DHX9P1-201ENST00000436565 3076 ntBASIC4.9□□□□□ -1.62
NUDCD3Q8IVD9 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
NUDCD3Q8IVD9 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 RNA5SP284-201ENST00000384547 118 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 RNU6-1320P-201ENST00000390838 107 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 RNU6-1269P-201ENST00000391139 107 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 ATP5HP3-201ENST00000396994 486 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 MIR1282-201ENST00000408865 101 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 MTCO3P17-201ENST00000443775 513 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 OR52Y1P-201ENST00000452418 828 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 YWHAEP1-201ENST00000453697 763 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 RNU6-599P-201ENST00000459383 107 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 RNU6-1193P-201ENST00000459461 107 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AP000942.1-201ENST00000463969 747 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC016687.1-201ENST00000482574 353 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 UGT2A3P7-201ENST00000510485 734 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 QTRT1P1-201ENST00000604344 1078 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 IMMP1LP1-201ENST00000605170 488 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AL049794.2-201ENST00000616301 365 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 MIR6861-201ENST00000618657 64 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 RNU6-368P-201ENST00000620928 107 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 RNU6-538P-201ENST00000622329 107 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 MIR1910-201ENST00000636955 80 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 RNF19BPY-201ENST00000458209 1550 ntBASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
NUDCD3Q8IVD9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms