Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.25□□□□□ -1.73
USF2Q15853 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USF2Q15853 SNORA48.4-201ENST00000391089 134 ntBASIC4.25□□□□□ -1.73
USF2Q15853 HMGB1P20-201ENST00000402555 677 ntBASIC4.25□□□□□ -1.73
USF2Q15853 VN1R3-201ENST00000418822 919 ntBASIC4.25□□□□□ -1.73
USF2Q15853 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
USF2Q15853 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.25□□□□□ -1.73
USF2Q15853 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.25□□□□□ -1.73
USF2Q15853 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
USF2Q15853 CALM1P2-201ENST00000452941 448 ntBASIC4.25□□□□□ -1.73
USF2Q15853 AC133473.1-201ENST00000455173 299 ntBASIC4.25□□□□□ -1.73
USF2Q15853 AP000797.2-201ENST00000475768 606 ntBASIC4.25□□□□□ -1.73
USF2Q15853 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.25□□□□□ -1.73
USF2Q15853 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.25□□□□□ -1.73
USF2Q15853 AC011037.1-201ENST00000483964 558 ntBASIC4.25□□□□□ -1.73
USF2Q15853 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.25□□□□□ -1.73
USF2Q15853 AC083829.1-201ENST00000503756 657 ntBASIC4.25□□□□□ -1.73
USF2Q15853 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USF2Q15853 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.25□□□□□ -1.73
USF2Q15853 IGHV3-63-201ENST00000518422 341 ntBASIC4.25□□□□□ -1.73
USF2Q15853 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.25□□□□□ -1.73
USF2Q15853 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.25□□□□□ -1.73
USF2Q15853 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.25□□□□□ -1.73
USF2Q15853 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.25□□□□□ -1.73
USF2Q15853 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.25□□□□□ -1.73
USF2Q15853 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
USF2Q15853 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.25□□□□□ -1.73
USF2Q15853 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.25□□□□□ -1.73
USF2Q15853 AC005726.4-201ENST00000582858 458 ntBASIC4.25□□□□□ -1.73
USF2Q15853 AC067773.1-201ENST00000603284 1094 ntBASIC4.25□□□□□ -1.73
USF2Q15853 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.25□□□□□ -1.73
USF2Q15853 AL445437.1-201ENST00000623157 3087 ntBASIC4.25□□□□□ -1.73
USF2Q15853 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
USF2Q15853 DDX18P4-201ENST00000511690 1966 ntBASIC4.25□□□□□ -1.73
USF2Q15853 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USF2Q15853 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
USF2Q15853 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.24□□□□□ -1.73
USF2Q15853 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 OR7E25P-201ENST00000344844 931 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AC023490.2-201ENST00000359859 470 ntBASIC4.24□□□□□ -1.73
USF2Q15853 RNA5SP394-201ENST00000364216 119 ntBASIC4.24□□□□□ -1.73
USF2Q15853 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 OR1L6-202ENST00000373684 1044 ntBASIC4.24□□□□□ -1.73
USF2Q15853 RPS3AP2-201ENST00000407190 754 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.24□□□□□ -1.73
USF2Q15853 ARAFP1-201ENST00000422172 605 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AC104333.2-201ENST00000422630 192 ntBASIC4.24□□□□□ -1.73
USF2Q15853 RPS12P5-201ENST00000423449 371 ntBASIC4.24□□□□□ -1.73
USF2Q15853 RPL7AP49-201ENST00000429522 581 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AC079807.1-201ENST00000429993 481 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.24□□□□□ -1.73
USF2Q15853 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.24□□□□□ -1.73
USF2Q15853 AL591438.1-201ENST00000433508 581 ntBASIC4.24□□□□□ -1.73
USF2Q15853 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.24□□□□□ -1.73
USF2Q15853 HMGN1P2-201ENST00000445197 310 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.24□□□□□ -1.73
USF2Q15853 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.24□□□□□ -1.73
USF2Q15853 HMGB3P21-201ENST00000452483 547 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AP000547.1-201ENST00000454360 617 ntBASIC4.24□□□□□ -1.73
USF2Q15853 HMGB1P4-201ENST00000455362 567 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.24□□□□□ -1.73
USF2Q15853 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.24□□□□□ -1.73
USF2Q15853 RN7SL727P-201ENST00000482164 296 ntBASIC4.24□□□□□ -1.73
USF2Q15853 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 AC090568.1-201ENST00000509499 856 ntBASIC4.24□□□□□ -1.73
USF2Q15853 RNU6-615P-201ENST00000516065 106 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.24□□□□□ -1.73
USF2Q15853 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
USF2Q15853 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.24□□□□□ -1.73
USF2Q15853 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.24□□□□□ -1.73
USF2Q15853 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.24□□□□□ -1.73
USF2Q15853 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.24□□□□□ -1.73
USF2Q15853 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.24□□□□□ -1.73
USF2Q15853 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.24□□□□□ -1.73
USF2Q15853 AC108738.1-201ENST00000603703 237 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AC010680.3-201ENST00000604215 520 ntBASIC4.24□□□□□ -1.73
USF2Q15853 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AL158196.1-201ENST00000616786 434 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 AP005431.1-201ENST00000618479 319 ntBASIC4.24□□□□□ -1.73
USF2Q15853 uc_338.7-201ENST00000621834 124 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AC129915.3-201ENST00000634128 948 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AC009950.2-201ENST00000636548 183 ntBASIC4.24□□□□□ -1.73
USF2Q15853 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
USF2Q15853 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 AC007342.7-201ENST00000624610 2337 ntBASIC4.24□□□□□ -1.73
USF2Q15853 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms