Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.05□□□□□ -1.6
LTBQ06643 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.05□□□□□ -1.6
LTBQ06643 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.05□□□□□ -1.6
LTBQ06643 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.05□□□□□ -1.6
LTBQ06643 AC092647.3-201ENST00000443044 633 ntBASIC5.05□□□□□ -1.6
LTBQ06643 LINC02210-201ENST00000444561 288 ntBASIC5.05□□□□□ -1.6
LTBQ06643 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.05□□□□□ -1.6
LTBQ06643 EEF1B2P6-201ENST00000445713 673 ntBASIC5.05□□□□□ -1.6
LTBQ06643 AL096829.2-201ENST00000446582 742 ntBASIC5.05□□□□□ -1.6
LTBQ06643 AZGP1P2-201ENST00000454506 345 ntBASIC5.05□□□□□ -1.6
LTBQ06643 AC096992.1-201ENST00000459808 709 ntBASIC5.05□□□□□ -1.6
LTBQ06643 RPL32P14-201ENST00000463196 378 ntBASIC5.05□□□□□ -1.6
LTBQ06643 AC008953.1-201ENST00000497334 318 ntBASIC5.05□□□□□ -1.6
LTBQ06643 AC020699.1-201ENST00000505161 445 ntBASIC5.05□□□□□ -1.6
LTBQ06643 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.05□□□□□ -1.6
LTBQ06643 AC069306.1-201ENST00000507006 843 ntBASIC5.05□□□□□ -1.6
LTBQ06643 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.05□□□□□ -1.6
LTBQ06643 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.05□□□□□ -1.6
LTBQ06643 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.05□□□□□ -1.6
LTBQ06643 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.05□□□□□ -1.6
LTBQ06643 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.05□□□□□ -1.6
LTBQ06643 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.05□□□□□ -1.6
LTBQ06643 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.05□□□□□ -1.6
LTBQ06643 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.05□□□□□ -1.6
LTBQ06643 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.05□□□□□ -1.6
LTBQ06643 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.05□□□□□ -1.6
LTBQ06643 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.05□□□□□ -1.6
LTBQ06643 AC010547.7-201ENST00000570323 333 ntBASIC5.05□□□□□ -1.6
LTBQ06643 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.05□□□□□ -1.6
LTBQ06643 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.05□□□□□ -1.6
LTBQ06643 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.05□□□□□ -1.6
LTBQ06643 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.05□□□□□ -1.6
LTBQ06643 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.05□□□□□ -1.6
LTBQ06643 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.05□□□□□ -1.6
LTBQ06643 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.05□□□□□ -1.6
LTBQ06643 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LTBQ06643 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LTBQ06643 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LTBQ06643 AC007938.2-201ENST00000604666 2634 ntBASIC5.05□□□□□ -1.6
LTBQ06643 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.05□□□□□ -1.6
LTBQ06643 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LTBQ06643 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LTBQ06643 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LTBQ06643 PABPC1P6-201ENST00000445594 1829 ntBASIC5.04□□□□□ -1.6
LTBQ06643 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.04□□□□□ -1.6
LTBQ06643 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
LTBQ06643 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LTBQ06643 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LTBQ06643 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LTBQ06643 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.04□□□□□ -1.6
LTBQ06643 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.04□□□□□ -1.6
LTBQ06643 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LTBQ06643 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LTBQ06643 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LTBQ06643 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LTBQ06643 RN7SKP124-201ENST00000364730 341 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.04□□□□□ -1.6
LTBQ06643 RPSAP35-201ENST00000413753 818 ntBASIC5.04□□□□□ -1.6
LTBQ06643 RBMY2KP-201ENST00000418221 992 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AC005005.2-201ENST00000420779 380 ntBASIC5.04□□□□□ -1.6
LTBQ06643 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.04□□□□□ -1.6
LTBQ06643 ARAFP1-201ENST00000422172 605 ntBASIC5.04□□□□□ -1.6
LTBQ06643 SETP9-201ENST00000423837 832 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.04□□□□□ -1.6
LTBQ06643 NPM1P26-201ENST00000426339 738 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.04□□□□□ -1.6
LTBQ06643 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.04□□□□□ -1.6
LTBQ06643 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.04□□□□□ -1.6
LTBQ06643 NDUFB4P8-201ENST00000435351 367 ntBASIC5.04□□□□□ -1.6
LTBQ06643 MTND2P21-201ENST00000436242 1042 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.04□□□□□ -1.6
LTBQ06643 AC006335.2-201ENST00000437993 330 ntBASIC5.04□□□□□ -1.6
LTBQ06643 GSTA7P-201ENST00000438425 448 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AC006326.1-201ENST00000445465 787 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.04□□□□□ -1.6
LTBQ06643 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.04□□□□□ -1.6
LTBQ06643 RPL35AP28-201ENST00000459730 331 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.04□□□□□ -1.6
LTBQ06643 ATP5LP5-201ENST00000483050 299 ntBASIC5.04□□□□□ -1.6
LTBQ06643 UBA52P7-201ENST00000486088 380 ntBASIC5.04□□□□□ -1.6
LTBQ06643 RPSAP51-201ENST00000497462 645 ntBASIC5.04□□□□□ -1.6
LTBQ06643 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.04□□□□□ -1.6
LTBQ06643 HIGD1AP14-201ENST00000507617 282 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AC138866.2-201ENST00000508650 584 ntBASIC5.04□□□□□ -1.6
LTBQ06643 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.04□□□□□ -1.6
LTBQ06643 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.04□□□□□ -1.6
LTBQ06643 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.04□□□□□ -1.6
LTBQ06643 SEC11B-201ENST00000518383 499 ntBASIC5.04□□□□□ -1.6
LTBQ06643 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LTBQ06643 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.04□□□□□ -1.6
LTBQ06643 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.04□□□□□ -1.6
LTBQ06643 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.04□□□□□ -1.6
LTBQ06643 MTND2P17-201ENST00000550281 688 ntBASIC5.04□□□□□ -1.6
LTBQ06643 CR383656.6-201ENST00000550518 394 ntBASIC5.04□□□□□ -1.6
LTBQ06643 HMGN2P6-201ENST00000551091 273 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.04□□□□□ -1.6
LTBQ06643 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.04□□□□□ -1.6
LTBQ06643 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.04□□□□□ -1.6
LTBQ06643 BNIP3P24-201ENST00000593398 557 ntBASIC5.04□□□□□ -1.6
LTBQ06643 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms