Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC108359.1-201ENST00000616451 1211 ntBASIC5.39□□□□□ -1.55
LHX1P48742 AC091932.2-201ENST00000623014 291 ntBASIC5.39□□□□□ -1.55
LHX1P48742 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.39□□□□□ -1.55
LHX1P48742 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LHX1P48742 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.39□□□□□ -1.55
LHX1P48742 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LHX1P48742 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LHX1P48742 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LHX1P48742 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LHX1P48742 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.39□□□□□ -1.55
LHX1P48742 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LHX1P48742 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
LHX1P48742 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LHX1P48742 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LHX1P48742 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
LHX1P48742 AC011503.2-201ENST00000594230 1500 ntBASIC5.38□□□□□ -1.55
LHX1P48742 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LHX1P48742 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LHX1P48742 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LHX1P48742 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
LHX1P48742 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LHX1P48742 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LHX1P48742 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LHX1P48742 MIR550A3-201ENST00000390735 95 ntBASIC5.38□□□□□ -1.55
LHX1P48742 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LHX1P48742 AL035079.1-201ENST00000405210 287 ntBASIC5.38□□□□□ -1.55
LHX1P48742 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LHX1P48742 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.38□□□□□ -1.55
LHX1P48742 AC013470.3-201ENST00000420252 1194 ntBASIC5.38□□□□□ -1.55
LHX1P48742 AL354766.1-201ENST00000423396 542 ntBASIC5.38□□□□□ -1.55
LHX1P48742 AL590623.1-201ENST00000427864 105 ntBASIC5.38□□□□□ -1.55
LHX1P48742 AL136231.1-201ENST00000429407 730 ntBASIC5.38□□□□□ -1.55
LHX1P48742 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.38□□□□□ -1.55
LHX1P48742 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.38□□□□□ -1.55
LHX1P48742 BX323845.1-201ENST00000432417 179 ntBASIC5.38□□□□□ -1.55
LHX1P48742 RHOT1P3-201ENST00000436571 331 ntBASIC5.38□□□□□ -1.55
LHX1P48742 IGHV5-78-201ENST00000450948 295 ntBASIC5.38□□□□□ -1.55
LHX1P48742 OTX2P1-201ENST00000450956 354 ntBASIC5.38□□□□□ -1.55
LHX1P48742 RPL7P61-201ENST00000451721 751 ntBASIC5.38□□□□□ -1.55
LHX1P48742 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.38□□□□□ -1.55
LHX1P48742 AC025181.1-201ENST00000477507 416 ntBASIC5.38□□□□□ -1.55
LHX1P48742 AC140172.1-201ENST00000502928 141 ntBASIC5.38□□□□□ -1.55
LHX1P48742 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.38□□□□□ -1.55
LHX1P48742 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.38□□□□□ -1.55
LHX1P48742 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.38□□□□□ -1.55
LHX1P48742 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.38□□□□□ -1.55
LHX1P48742 AP001922.4-201ENST00000526967 290 ntBASIC5.38□□□□□ -1.55
LHX1P48742 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.38□□□□□ -1.55
LHX1P48742 OR5D15P-201ENST00000531671 942 ntBASIC5.38□□□□□ -1.55
LHX1P48742 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.38□□□□□ -1.55
LHX1P48742 PCNPP1-201ENST00000552501 511 ntBASIC5.38□□□□□ -1.55
LHX1P48742 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.38□□□□□ -1.55
LHX1P48742 EDDM3DP-201ENST00000554692 434 ntBASIC5.38□□□□□ -1.55
LHX1P48742 NDUFB4P11-201ENST00000560510 395 ntBASIC5.38□□□□□ -1.55
LHX1P48742 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.38□□□□□ -1.55
LHX1P48742 AC005084.1-201ENST00000605160 304 ntBASIC5.38□□□□□ -1.55
LHX1P48742 AC073111.2-201ENST00000605657 1075 ntBASIC5.38□□□□□ -1.55
LHX1P48742 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.38□□□□□ -1.55
LHX1P48742 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.38□□□□□ -1.55
LHX1P48742 OR51C1P-201ENST00000608504 942 ntBASIC5.38□□□□□ -1.55
LHX1P48742 AC084036.1-201ENST00000609190 508 ntBASIC5.38□□□□□ -1.55
LHX1P48742 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.38□□□□□ -1.55
LHX1P48742 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
LHX1P48742 AC022417.1-201ENST00000624768 1303 ntBASIC5.38□□□□□ -1.55
LHX1P48742 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LHX1P48742 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LHX1P48742 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LHX1P48742 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.38□□□□□ -1.55
LHX1P48742 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LHX1P48742 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LHX1P48742 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LHX1P48742 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.37□□□□□ -1.55
LHX1P48742 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LHX1P48742 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.37□□□□□ -1.55
LHX1P48742 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
LHX1P48742 AC083843.2-201ENST00000568248 6253 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AP001029.2-203ENST00000589795 4910 ntBASIC5.37□□□□□ -1.55
LHX1P48742 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LHX1P48742 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
LHX1P48742 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.37□□□□□ -1.55
LHX1P48742 AL022322.2-201ENST00000624072 20397 ntBASIC5.37□□□□□ -1.55
LHX1P48742 MIR133A2-201ENST00000347538 102 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
LHX1P48742 RN7SKP104-201ENST00000362605 328 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AL589655.1-201ENST00000405398 482 ntBASIC5.37□□□□□ -1.55
LHX1P48742 SNORA11B-201ENST00000408175 129 ntBASIC5.37□□□□□ -1.55
LHX1P48742 SNORA77-201ENST00000408716 125 ntBASIC5.37□□□□□ -1.55
LHX1P48742 RPL12P9-201ENST00000412942 488 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.37□□□□□ -1.55
LHX1P48742 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LHX1P48742 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.37□□□□□ -1.55
LHX1P48742 TXNP2-201ENST00000443918 295 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AL137845.2-201ENST00000444292 988 ntBASIC5.37□□□□□ -1.55
LHX1P48742 TCEA1P1-201ENST00000449716 880 ntBASIC5.37□□□□□ -1.55
LHX1P48742 HIGD1AP8-201ENST00000453927 274 ntBASIC5.37□□□□□ -1.55
LHX1P48742 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.37□□□□□ -1.55
LHX1P48742 snoU13.20-201ENST00000459180 104 ntBASIC5.37□□□□□ -1.55
LHX1P48742 RN7SL319P-201ENST00000480656 221 ntBASIC5.37□□□□□ -1.55
LHX1P48742 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LHX1P48742 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms