Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFBP01127 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.28□□□□□ -1.56
PDGFBP01127 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFBP01127 FAM106CP-201ENST00000582212 507 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.28□□□□□ -1.56
PDGFBP01127 AC006115.2-201ENST00000596823 202 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFBP01127 AC005252.1-201ENST00000604518 1063 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 AL133481.2-203ENST00000607558 139 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.28□□□□□ -1.56
PDGFBP01127 AC005725.1-201ENST00000577346 2607 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.28□□□□□ -1.56
PDGFBP01127 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PDGFBP01127 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.28□□□□□ -1.56
PDGFBP01127 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.28□□□□□ -1.56
PDGFBP01127 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.28□□□□□ -1.56
PDGFBP01127 AC139713.2-214ENST00000642059 1811 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.27□□□□□ -1.57
PDGFBP01127 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.27□□□□□ -1.57
PDGFBP01127 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PDGFBP01127 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFBP01127 AC011504.1-201ENST00000623331 4103 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.27□□□□□ -1.57
PDGFBP01127 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PDGFBP01127 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFBP01127 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFBP01127 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
PDGFBP01127 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFBP01127 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFBP01127 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.27□□□□□ -1.57
PDGFBP01127 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFBP01127 OR51A6P-201ENST00000418680 1004 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 RPS27AP7-201ENST00000422792 455 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 TPTE2P1-204ENST00000435256 593 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.27□□□□□ -1.57
PDGFBP01127 AC044797.1-201ENST00000445744 679 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 AL356390.1-201ENST00000455684 397 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 PPIAP21-201ENST00000464473 501 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 RPS27AP18-201ENST00000515536 459 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.27□□□□□ -1.57
PDGFBP01127 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.27□□□□□ -1.57
PDGFBP01127 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.27□□□□□ -1.57
PDGFBP01127 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.27□□□□□ -1.57
PDGFBP01127 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.27□□□□□ -1.57
PDGFBP01127 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFBP01127 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.27□□□□□ -1.57
PDGFBP01127 AL163952.1-202ENST00000569625 600 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 RN7SL356P-201ENST00000582228 248 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.27□□□□□ -1.57
PDGFBP01127 MIR4715-201ENST00000584117 79 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.27□□□□□ -1.57
PDGFBP01127 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PDGFBP01127 AC092070.2-203ENST00000598377 3644 ntBASIC5.27□□□□□ -1.57
PDGFBP01127 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.27□□□□□ -1.57
PDGFBP01127 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.27□□□□□ -1.57
PDGFBP01127 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFBP01127 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.27□□□□□ -1.57
PDGFBP01127 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFBP01127 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFBP01127 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFBP01127 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.26□□□□□ -1.57
PDGFBP01127 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PDGFBP01127 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
PDGFBP01127 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 SAMMSON-226ENST00000642089 1582 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PDGFBP01127 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.26□□□□□ -1.57
PDGFBP01127 DBIP1-201ENST00000401435 260 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFBP01127 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 AC093084.1-201ENST00000424233 687 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 MRPS21P2-201ENST00000424704 264 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFBP01127 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFBP01127 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFBP01127 RPL7P11-201ENST00000437586 658 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 RPL12P39-201ENST00000455456 496 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 RPL12P20-201ENST00000475538 479 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 AK3P4-201ENST00000504283 583 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms