Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 UBE2V1P15-201ENST00000407776 448 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 U3.36-201ENST00000408418 213 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 VN1R31P-201ENST00000417498 730 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 EI24P4-201ENST00000423683 1078 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 RPL7AP49-201ENST00000429522 581 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AL591438.1-201ENST00000433508 581 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AC016772.1-201ENST00000444170 1261 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 EIF3KP3-201ENST00000514461 639 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AP000859.1-201ENST00000525536 307 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AC011626.1-201ENST00000604710 562 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 TAS2R6P-201ENST00000605022 826 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AC211433.2-201ENST00000608433 387 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 RPSAP73-201ENST00000614820 330 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AL590396.2-201ENST00000636511 1041 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 AC135068.12-201ENST00000637370 931 ntBASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX9Q9Y5X1 TCP1P3-201ENST00000414406 1498 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC114947.2-201ENST00000565748 2125 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 RNA5SP507-201ENST00000363603 121 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 MIR589-201ENST00000385238 99 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC211486.3-201ENST00000412694 621 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 HSPE1P16-201ENST00000426640 348 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 RPS4XP16-201ENST00000427198 791 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 HSFY7P-201ENST00000432672 318 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 RPL19P16-201ENST00000433839 588 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AL161722.2-201ENST00000434731 981 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 HSFY8P-201ENST00000437934 318 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 SCAND3P1-201ENST00000439854 1060 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 HSFY5P-201ENST00000453726 309 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 DNAJB5P1-201ENST00000454004 806 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC108161.1-201ENST00000461060 402 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 RN7SL189P-201ENST00000468631 289 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 RPSAP51-201ENST00000497462 645 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC006427.1-201ENST00000514359 712 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 RNA5SP230-201ENST00000517039 122 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC051619.2-201ENST00000559063 397 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 RN7SL708P-201ENST00000580952 299 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC040174.2-201ENST00000602701 465 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 BNIP3P35-201ENST00000604530 490 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AL162574.1-201ENST00000615702 950 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC026367.3-201ENST00000619032 590 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC099494.2-201ENST00000623371 978 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC006453.5-201ENST00000636451 619 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 AC106858.1-201ENST00000637497 429 ntBASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX9Q9Y5X1 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
SNX9Q9Y5X1 PANDAR-201ENST00000629595 1506 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AC083899.2-201ENST00000423285 1376 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AL512283.1-201ENST00000606756 1384 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms