Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF6Q9Y252 AC006272.2-201ENST00000594725 163 ntBASIC4.9□□□□□ -1.63
RNF6Q9Y252 AC087763.1-201ENST00000603391 286 ntBASIC4.9□□□□□ -1.63
RNF6Q9Y252 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.9□□□□□ -1.63
RNF6Q9Y252 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF6Q9Y252 Mico1.1-201ENST00000611698 204 ntBASIC4.9□□□□□ -1.63
RNF6Q9Y252 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RNF6Q9Y252 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF6Q9Y252 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF6Q9Y252 PCAT14-202ENST00000627127 3935 ntBASIC4.9□□□□□ -1.63
RNF6Q9Y252 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF6Q9Y252 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF6Q9Y252 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF6Q9Y252 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF6Q9Y252 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RNF6Q9Y252 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 STX3-208ENST00000641815 3236 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF6Q9Y252 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF6Q9Y252 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF6Q9Y252 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 MIR133B-201ENST00000362210 119 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 RNA5SP443-201ENST00000363083 132 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF6Q9Y252 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 MIR137-201ENST00000385223 102 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 MIR550A3-201ENST00000390735 95 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 GAPDHP15-201ENST00000398586 975 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 AL645733.1-201ENST00000402250 217 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 AC007738.1-201ENST00000413892 348 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 AC106901.1-201ENST00000425086 698 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 AL590762.4-201ENST00000425885 253 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 HSPE1P16-201ENST00000426640 348 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 DSTNP5-201ENST00000427921 523 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 AL035090.1-201ENST00000454835 332 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 AC105918.1-201ENST00000474399 838 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF6Q9Y252 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF6Q9Y252 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 RN7SL435P-201ENST00000584418 282 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 AP003400.3-201ENST00000624904 346 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 AC011493.1-201ENST00000596753 1632 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF6Q9Y252 AC007996.1-201ENST00000620414 2821 ntBASIC4.89□□□□□ -1.63
RNF6Q9Y252 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RNF6Q9Y252 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF6Q9Y252 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 U3.2-201ENST00000362981 210 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 UBBP2-201ENST00000376781 231 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 SNORA67-201ENST00000384423 137 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 RNU6-1320P-201ENST00000390838 107 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 RNU6-1269P-201ENST00000391139 107 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 RPL31P53-201ENST00000457065 348 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 RNU6-599P-201ENST00000459383 107 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 RNU6-1193P-201ENST00000459461 107 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 AC022336.1-201ENST00000475510 337 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 RN7SL97P-201ENST00000486780 299 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 RN7SL814P-201ENST00000487715 300 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 AC022360.1-201ENST00000521058 340 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 BNIP3P1-201ENST00000547295 580 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF6Q9Y252 OR11J2P-201ENST00000555298 907 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF6Q9Y252 RBM22P1-201ENST00000578589 1214 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 AP005262.1-201ENST00000582646 997 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 AC060766.1-201ENST00000590824 627 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 AL590410.1-201ENST00000617925 333 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms