Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 AC006455.6-201ENST00000426192 893 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 HSPE1P16-201ENST00000426640 348 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 RPS4XP16-201ENST00000427198 791 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 RPS27P18-201ENST00000431701 247 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 TXNP5-201ENST00000441043 315 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 CEACAMP7-201ENST00000444105 496 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 SBDSP1-204ENST00000453858 737 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 RPS4XP12-201ENST00000461747 709 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 RPL7AP6-201ENST00000477943 801 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 RPL5P22-201ENST00000480199 884 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 RPS4XP20-201ENST00000505751 772 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 AC095055.1-201ENST00000603472 1113 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 TAS2R6P-201ENST00000605022 826 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 AC009163.6-201ENST00000612367 342 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 AF117829.2-201ENST00000619538 361 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 AC068870.2-201ENST00000620635 389 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 SOCS5P3-201ENST00000425115 1576 ntBASIC5.15□□□□□ -1.59
C9orf72Q96LT7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.15□□□□□ -1.59
C9orf72Q96LT7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 SCARNA15-201ENST00000607520 4325 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 AC007996.1-201ENST00000620414 2821 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 SNORA17.1-201ENST00000362945 126 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 RPS26P4-201ENST00000431743 355 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 BX323845.1-201ENST00000432417 179 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 AL691482.1-201ENST00000453255 87 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 GYG1P1-201ENST00000460864 698 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 RN7SL443P-201ENST00000464331 290 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 RN7SL826P-201ENST00000479724 288 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 AC090686.1-201ENST00000481577 749 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 RN7SL441P-201ENST00000492388 296 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 RN7SKP5-201ENST00000517045 272 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 OR4A46P-201ENST00000527255 933 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 AL512310.9-201ENST00000553311 948 ntBASIC5.14□□□□□ -1.59
C9orf72Q96LT7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
C9orf72Q96LT7 TCP1P3-201ENST00000414406 1498 ntBASIC5.13□□□□□ -1.59
C9orf72Q96LT7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
C9orf72Q96LT7 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
C9orf72Q96LT7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
C9orf72Q96LT7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.13□□□□□ -1.59
C9orf72Q96LT7 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
C9orf72Q96LT7 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
C9orf72Q96LT7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
C9orf72Q96LT7 RNU1-106P-201ENST00000384382 164 ntBASIC5.13□□□□□ -1.59
C9orf72Q96LT7 MIR1182-201ENST00000408363 97 ntBASIC5.13□□□□□ -1.59
C9orf72Q96LT7 U3.36-201ENST00000408418 213 ntBASIC5.13□□□□□ -1.59
C9orf72Q96LT7 MIR1271-201ENST00000408537 86 ntBASIC5.13□□□□□ -1.59
C9orf72Q96LT7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.13□□□□□ -1.59
C9orf72Q96LT7 QRSL1P2-201ENST00000418582 964 ntBASIC5.13□□□□□ -1.59
C9orf72Q96LT7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.13□□□□□ -1.59
C9orf72Q96LT7 NPM1P48-201ENST00000436002 853 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms