Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.14□□□□□ -1.59
CBX1P83916 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.14□□□□□ -1.59
CBX1P83916 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.14□□□□□ -1.59
CBX1P83916 OR2AM1P-201ENST00000422137 422 ntBASIC5.14□□□□□ -1.59
CBX1P83916 BX119321.1-201ENST00000428912 797 ntBASIC5.14□□□□□ -1.59
CBX1P83916 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.14□□□□□ -1.59
CBX1P83916 PRPF38AP2-201ENST00000438179 851 ntBASIC5.14□□□□□ -1.59
CBX1P83916 AC073109.1-201ENST00000445066 978 ntBASIC5.14□□□□□ -1.59
CBX1P83916 AC004980.3-201ENST00000447046 365 ntBASIC5.14□□□□□ -1.59
CBX1P83916 AC079168.1-201ENST00000458741 345 ntBASIC5.14□□□□□ -1.59
CBX1P83916 RNU6-599P-201ENST00000459383 107 ntBASIC5.14□□□□□ -1.59
CBX1P83916 RNU6-1193P-201ENST00000459461 107 ntBASIC5.14□□□□□ -1.59
CBX1P83916 AC090142.2-201ENST00000483263 416 ntBASIC5.14□□□□□ -1.59
CBX1P83916 RN7SL423P-201ENST00000486202 304 ntBASIC5.14□□□□□ -1.59
CBX1P83916 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.14□□□□□ -1.59
CBX1P83916 MTCO3P42-201ENST00000509488 518 ntBASIC5.14□□□□□ -1.59
CBX1P83916 MTCO3P39-201ENST00000514812 518 ntBASIC5.14□□□□□ -1.59
CBX1P83916 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.14□□□□□ -1.59
CBX1P83916 AC025857.1-201ENST00000525252 377 ntBASIC5.14□□□□□ -1.59
CBX1P83916 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.14□□□□□ -1.59
CBX1P83916 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.14□□□□□ -1.59
CBX1P83916 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.14□□□□□ -1.59
CBX1P83916 AL358913.1-201ENST00000554342 121 ntBASIC5.14□□□□□ -1.59
CBX1P83916 MIR3154-201ENST00000577829 84 ntBASIC5.14□□□□□ -1.59
CBX1P83916 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.14□□□□□ -1.59
CBX1P83916 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.14□□□□□ -1.59
CBX1P83916 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.14□□□□□ -1.59
CBX1P83916 RNU6-368P-201ENST00000620928 107 ntBASIC5.14□□□□□ -1.59
CBX1P83916 AC074140.1-201ENST00000621617 208 ntBASIC5.14□□□□□ -1.59
CBX1P83916 RNU6-538P-201ENST00000622329 107 ntBASIC5.14□□□□□ -1.59
CBX1P83916 AP001052.1-201ENST00000626421 99 ntBASIC5.14□□□□□ -1.59
CBX1P83916 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CBX1P83916 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.14□□□□□ -1.59
CBX1P83916 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.14□□□□□ -1.59
CBX1P83916 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CBX1P83916 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CBX1P83916 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.14□□□□□ -1.59
CBX1P83916 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CBX1P83916 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CBX1P83916 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CBX1P83916 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.13□□□□□ -1.59
CBX1P83916 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CBX1P83916 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CBX1P83916 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.13□□□□□ -1.59
CBX1P83916 SNORA64.1-201ENST00000362600 132 ntBASIC5.13□□□□□ -1.59
CBX1P83916 RNU6-697P-201ENST00000363348 107 ntBASIC5.13□□□□□ -1.59
CBX1P83916 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.13□□□□□ -1.59
CBX1P83916 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CBX1P83916 RNU6-729P-201ENST00000384399 107 ntBASIC5.13□□□□□ -1.59
CBX1P83916 MIR551A-201ENST00000385042 96 ntBASIC5.13□□□□□ -1.59
CBX1P83916 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CBX1P83916 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.13□□□□□ -1.59
CBX1P83916 RN7SKP216-201ENST00000411050 312 ntBASIC5.13□□□□□ -1.59
CBX1P83916 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.13□□□□□ -1.59
CBX1P83916 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.13□□□□□ -1.59
CBX1P83916 AL359885.1-201ENST00000415786 903 ntBASIC5.13□□□□□ -1.59
CBX1P83916 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.13□□□□□ -1.59
CBX1P83916 GAPDHP49-201ENST00000421421 961 ntBASIC5.13□□□□□ -1.59
CBX1P83916 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.13□□□□□ -1.59
CBX1P83916 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.13□□□□□ -1.59
CBX1P83916 AC099782.1-201ENST00000425889 474 ntBASIC5.13□□□□□ -1.59
CBX1P83916 DYNLL1P7-201ENST00000429273 258 ntBASIC5.13□□□□□ -1.59
CBX1P83916 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.13□□□□□ -1.59
CBX1P83916 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.13□□□□□ -1.59
CBX1P83916 AL161722.2-201ENST00000434731 981 ntBASIC5.13□□□□□ -1.59
CBX1P83916 LINC00328-2P-201ENST00000436585 219 ntBASIC5.13□□□□□ -1.59
CBX1P83916 AC064862.5-201ENST00000440618 334 ntBASIC5.13□□□□□ -1.59
CBX1P83916 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CBX1P83916 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.13□□□□□ -1.59
CBX1P83916 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.13□□□□□ -1.59
CBX1P83916 AL691482.1-201ENST00000453255 87 ntBASIC5.13□□□□□ -1.59
CBX1P83916 AL121877.1-201ENST00000453704 622 ntBASIC5.13□□□□□ -1.59
CBX1P83916 AC133473.1-201ENST00000455173 299 ntBASIC5.13□□□□□ -1.59
CBX1P83916 RPL23AP2-201ENST00000471227 466 ntBASIC5.13□□□□□ -1.59
CBX1P83916 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.13□□□□□ -1.59
CBX1P83916 RN7SL214P-201ENST00000487317 265 ntBASIC5.13□□□□□ -1.59
CBX1P83916 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.13□□□□□ -1.59
CBX1P83916 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CBX1P83916 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CBX1P83916 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.13□□□□□ -1.59
CBX1P83916 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.13□□□□□ -1.59
CBX1P83916 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.13□□□□□ -1.59
CBX1P83916 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.13□□□□□ -1.59
CBX1P83916 AC092332.1-201ENST00000563684 829 ntBASIC5.13□□□□□ -1.59
CBX1P83916 MT1CP-201ENST00000567054 174 ntBASIC5.13□□□□□ -1.59
CBX1P83916 OR1AB1P-201ENST00000585564 761 ntBASIC5.13□□□□□ -1.59
CBX1P83916 AC011487.3-201ENST00000593607 453 ntBASIC5.13□□□□□ -1.59
CBX1P83916 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.13□□□□□ -1.59
CBX1P83916 AC004801.6-201ENST00000616571 978 ntBASIC5.13□□□□□ -1.59
CBX1P83916 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.13□□□□□ -1.59
CBX1P83916 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
CBX1P83916 PDZK1P1-202ENST00000425209 1350 ntBASIC5.13□□□□□ -1.59
CBX1P83916 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.13□□□□□ -1.59
CBX1P83916 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CBX1P83916 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
CBX1P83916 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CBX1P83916 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CBX1P83916 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CBX1P83916 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CBX1P83916 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms