Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD4P46934 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NEDD4P46934 U3.30-201ENST00000391308 210 ntBASIC5.77□□□□□ -1.49
NEDD4P46934 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.77□□□□□ -1.49
NEDD4P46934 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEDD4P46934 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.77□□□□□ -1.49
NEDD4P46934 OR5M12P-201ENST00000423388 929 ntBASIC5.77□□□□□ -1.49
NEDD4P46934 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.77□□□□□ -1.49
NEDD4P46934 RPL35AP21-201ENST00000437667 333 ntBASIC5.77□□□□□ -1.49
NEDD4P46934 OR52J1P-201ENST00000450596 932 ntBASIC5.77□□□□□ -1.49
NEDD4P46934 AC093166.2-201ENST00000455969 1017 ntBASIC5.77□□□□□ -1.49
NEDD4P46934 GAPDHP56-201ENST00000506031 988 ntBASIC5.77□□□□□ -1.49
NEDD4P46934 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.77□□□□□ -1.49
NEDD4P46934 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.77□□□□□ -1.49
NEDD4P46934 RPL23AP53-201ENST00000521854 457 ntBASIC5.77□□□□□ -1.49
NEDD4P46934 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.77□□□□□ -1.49
NEDD4P46934 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.77□□□□□ -1.49
NEDD4P46934 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.77□□□□□ -1.49
NEDD4P46934 MIR4443-201ENST00000585052 53 ntBASIC5.77□□□□□ -1.49
NEDD4P46934 AC011487.3-201ENST00000593607 453 ntBASIC5.77□□□□□ -1.49
NEDD4P46934 Mico1.1-201ENST00000611698 204 ntBASIC5.77□□□□□ -1.49
NEDD4P46934 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.77□□□□□ -1.49
NEDD4P46934 AC091953.3-201ENST00000623220 236 ntBASIC5.77□□□□□ -1.49
NEDD4P46934 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NEDD4P46934 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEDD4P46934 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEDD4P46934 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEDD4P46934 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.77□□□□□ -1.49
NEDD4P46934 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.77□□□□□ -1.49
NEDD4P46934 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEDD4P46934 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NEDD4P46934 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEDD4P46934 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NEDD4P46934 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEDD4P46934 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.76□□□□□ -1.49
NEDD4P46934 RN7SKP149-201ENST00000363008 344 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.76□□□□□ -1.49
NEDD4P46934 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEDD4P46934 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEDD4P46934 AC007738.1-201ENST00000413892 348 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 RPL12P43-201ENST00000420608 499 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 MTND4LP12-201ENST00000448237 295 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.76□□□□□ -1.49
NEDD4P46934 AC063943.1-201ENST00000465434 453 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 AC073073.1-201ENST00000493920 463 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 AC105233.1-201ENST00000498840 781 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEDD4P46934 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.76□□□□□ -1.49
NEDD4P46934 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.76□□□□□ -1.49
NEDD4P46934 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.76□□□□□ -1.49
NEDD4P46934 OR5D15P-201ENST00000531671 942 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.76□□□□□ -1.49
NEDD4P46934 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.76□□□□□ -1.49
NEDD4P46934 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NEDD4P46934 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.76□□□□□ -1.49
NEDD4P46934 MIR3934-201ENST00000579806 107 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
NEDD4P46934 AC010424.2-201ENST00000607594 443 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.76□□□□□ -1.49
NEDD4P46934 MAPK10-304ENST00000641341 3984 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
NEDD4P46934 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEDD4P46934 AC000374.1-201ENST00000434698 1745 ntBASIC5.76□□□□□ -1.49
NEDD4P46934 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEDD4P46934 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.76□□□□□ -1.49
NEDD4P46934 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NEDD4P46934 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEDD4P46934 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
NEDD4P46934 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NEDD4P46934 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NEDD4P46934 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
NEDD4P46934 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEDD4P46934 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
NEDD4P46934 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NEDD4P46934 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NEDD4P46934 AL645608.4-201ENST00000423619 154 ntBASIC5.75□□□□□ -1.49
NEDD4P46934 OR2B7P-201ENST00000429302 934 ntBASIC5.75□□□□□ -1.49
NEDD4P46934 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.75□□□□□ -1.49
NEDD4P46934 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.75□□□□□ -1.49
NEDD4P46934 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.75□□□□□ -1.49
NEDD4P46934 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.75□□□□□ -1.49
NEDD4P46934 AURKAPS2-201ENST00000454983 333 ntBASIC5.75□□□□□ -1.49
NEDD4P46934 AC083982.1-201ENST00000485679 344 ntBASIC5.75□□□□□ -1.49
NEDD4P46934 OR7H2P-201ENST00000513483 306 ntBASIC5.75□□□□□ -1.49
NEDD4P46934 BRD9P1-201ENST00000529855 560 ntBASIC5.75□□□□□ -1.49
NEDD4P46934 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEDD4P46934 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.75□□□□□ -1.49
NEDD4P46934 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.75□□□□□ -1.49
NEDD4P46934 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.75□□□□□ -1.49
NEDD4P46934 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.75□□□□□ -1.49
NEDD4P46934 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.75□□□□□ -1.49
NEDD4P46934 AP001521.2-201ENST00000608772 546 ntBASIC5.75□□□□□ -1.49
NEDD4P46934 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.75□□□□□ -1.49
NEDD4P46934 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.75□□□□□ -1.49
NEDD4P46934 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEDD4P46934 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEDD4P46934 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NEDD4P46934 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms