Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.33□□□□□ -1.56
LDB2O43679 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.33□□□□□ -1.56
LDB2O43679 AL136231.1-201ENST00000429407 730 ntBASIC5.33□□□□□ -1.56
LDB2O43679 MTATP6P17-201ENST00000431030 672 ntBASIC5.33□□□□□ -1.56
LDB2O43679 Z80107.1-201ENST00000436830 412 ntBASIC5.33□□□□□ -1.56
LDB2O43679 BUD31P2-201ENST00000449374 300 ntBASIC5.33□□□□□ -1.56
LDB2O43679 RPS26P41-201ENST00000450370 284 ntBASIC5.33□□□□□ -1.56
LDB2O43679 AL606490.1-201ENST00000452266 765 ntBASIC5.33□□□□□ -1.56
LDB2O43679 AC104634.1-201ENST00000452720 462 ntBASIC5.33□□□□□ -1.56
LDB2O43679 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.33□□□□□ -1.56
LDB2O43679 AC026348.1-201ENST00000462549 1053 ntBASIC5.33□□□□□ -1.56
LDB2O43679 OR2AO1P-201ENST00000476497 403 ntBASIC5.33□□□□□ -1.56
LDB2O43679 AC008638.1-201ENST00000506035 866 ntBASIC5.33□□□□□ -1.56
LDB2O43679 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LDB2O43679 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.33□□□□□ -1.56
LDB2O43679 AC067904.2-201ENST00000517322 1283 ntBASIC5.33□□□□□ -1.56
LDB2O43679 AC022360.1-201ENST00000521058 340 ntBASIC5.33□□□□□ -1.56
LDB2O43679 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.33□□□□□ -1.56
LDB2O43679 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LDB2O43679 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LDB2O43679 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.33□□□□□ -1.56
LDB2O43679 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.33□□□□□ -1.56
LDB2O43679 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.33□□□□□ -1.56
LDB2O43679 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.33□□□□□ -1.56
LDB2O43679 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.33□□□□□ -1.56
LDB2O43679 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.33□□□□□ -1.56
LDB2O43679 RN7SL339P-201ENST00000580597 296 ntBASIC5.33□□□□□ -1.56
LDB2O43679 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.33□□□□□ -1.56
LDB2O43679 AL162431.4-201ENST00000604674 411 ntBASIC5.33□□□□□ -1.56
LDB2O43679 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.33□□□□□ -1.56
LDB2O43679 MIR1264-201ENST00000616374 69 ntBASIC5.33□□□□□ -1.56
LDB2O43679 AC005840.5-201ENST00000619166 599 ntBASIC5.33□□□□□ -1.56
LDB2O43679 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
LDB2O43679 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LDB2O43679 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LDB2O43679 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.33□□□□□ -1.56
LDB2O43679 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LDB2O43679 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.33□□□□□ -1.56
LDB2O43679 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LDB2O43679 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.33□□□□□ -1.56
LDB2O43679 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LDB2O43679 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
LDB2O43679 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LDB2O43679 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 AL034549.2-201ENST00000618285 3373 ntBASIC5.32□□□□□ -1.56
LDB2O43679 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
LDB2O43679 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.32□□□□□ -1.56
LDB2O43679 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
LDB2O43679 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.32□□□□□ -1.56
LDB2O43679 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.32□□□□□ -1.56
LDB2O43679 OR9K1P-201ENST00000326513 941 ntBASIC5.32□□□□□ -1.56
LDB2O43679 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 Z86062.1-201ENST00000406773 777 ntBASIC5.32□□□□□ -1.56
LDB2O43679 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.32□□□□□ -1.56
LDB2O43679 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.32□□□□□ -1.56
LDB2O43679 RANP4-201ENST00000413361 655 ntBASIC5.32□□□□□ -1.56
LDB2O43679 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.32□□□□□ -1.56
LDB2O43679 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.32□□□□□ -1.56
LDB2O43679 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.32□□□□□ -1.56
LDB2O43679 AC079168.1-201ENST00000458741 345 ntBASIC5.32□□□□□ -1.56
LDB2O43679 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 SNRPCP3-201ENST00000474888 476 ntBASIC5.32□□□□□ -1.56
LDB2O43679 RPL7P6-201ENST00000480903 738 ntBASIC5.32□□□□□ -1.56
LDB2O43679 RN7SL447P-201ENST00000494711 245 ntBASIC5.32□□□□□ -1.56
LDB2O43679 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.32□□□□□ -1.56
LDB2O43679 MTCO3P27-201ENST00000514397 196 ntBASIC5.32□□□□□ -1.56
LDB2O43679 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.32□□□□□ -1.56
LDB2O43679 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.32□□□□□ -1.56
LDB2O43679 SOX5P1-201ENST00000524155 1127 ntBASIC5.32□□□□□ -1.56
LDB2O43679 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.32□□□□□ -1.56
LDB2O43679 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.32□□□□□ -1.56
LDB2O43679 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.32□□□□□ -1.56
LDB2O43679 AC027369.5-201ENST00000533838 755 ntBASIC5.32□□□□□ -1.56
LDB2O43679 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LDB2O43679 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.32□□□□□ -1.56
LDB2O43679 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 RPL10P14-201ENST00000565265 298 ntBASIC5.32□□□□□ -1.56
LDB2O43679 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 MIR1269B-201ENST00000580405 75 ntBASIC5.32□□□□□ -1.56
LDB2O43679 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 CLIC4P2-201ENST00000601934 717 ntBASIC5.32□□□□□ -1.56
LDB2O43679 AC005252.1-201ENST00000604518 1063 ntBASIC5.32□□□□□ -1.56
LDB2O43679 MIR6839-201ENST00000620425 113 ntBASIC5.32□□□□□ -1.56
LDB2O43679 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.32□□□□□ -1.56
LDB2O43679 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.32□□□□□ -1.56
LDB2O43679 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LDB2O43679 AC099654.8-201ENST00000637757 681 ntBASIC5.32□□□□□ -1.56
LDB2O43679 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.32□□□□□ -1.56
LDB2O43679 AC026523.2-201ENST00000625039 7739 ntBASIC5.32□□□□□ -1.56
LDB2O43679 AC083843.2-201ENST00000568248 6253 ntBASIC5.32□□□□□ -1.56
LDB2O43679 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
LDB2O43679 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
LDB2O43679 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms