Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AL035551.1-201ENST00000446931 348 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC110749.1-201ENST00000462007 357 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AL603882.1-201ENST00000463059 681 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC104108.1-201ENST00000509930 412 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC026782.2-201ENST00000510845 636 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 RNA5SP303-201ENST00000516192 130 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 OR8G5-201ENST00000524943 1041 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 POLR2KP1-201ENST00000553226 168 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC125494.3-201ENST00000602759 455 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC145423.1-201ENST00000605712 336 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC015712.7-201ENST00000615211 635 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AL121890.3-201ENST00000618494 516 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC097520.1-201ENST00000624435 385 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AC130304.1-201ENST00000622942 2385 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 HSPA8P17-201ENST00000427029 1382 ntBASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NECTIN3Q9NQS3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC073055.1-201ENST00000456901 1621 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC002525.1-201ENST00000624392 1622 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 RNU6-225P-201ENST00000384613 103 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 SNORA11.3-201ENST00000408471 128 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AL449283.1-202ENST00000418249 604 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 NANOGP5-201ENST00000424456 877 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC126120.1-201ENST00000431082 470 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC093166.4-201ENST00000457867 318 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC084754.1-201ENST00000463466 464 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC011476.1-201ENST00000466725 307 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 RPL38P3-201ENST00000484463 213 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 HPRT1P1-201ENST00000509498 657 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 RNU6-1028P-201ENST00000517164 93 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AP001207.2-201ENST00000519490 539 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 IGLV3-30-201ENST00000524362 298 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 OR10V3P-201ENST00000525712 725 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AP000648.1-201ENST00000529682 397 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 TRIM51DP-201ENST00000529746 596 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AL132857.1-201ENST00000555180 708 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC095057.3-201ENST00000567102 1157 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 ZNF92P3-201ENST00000596594 954 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC027243.2-201ENST00000602530 724 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AL160237.3-201ENST00000604114 1013 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AL445435.1-201ENST00000604232 665 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AL031601.1-201ENST00000605702 394 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 SNORA11.6-201ENST00000619030 128 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC008115.4-201ENST00000619780 775 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 AC024595.1-201ENST00000623088 387 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 SNX18P12-201ENST00000624821 759 ntBASIC5.52□□□□□ -1.53
NECTIN3Q9NQS3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms