Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 RPL10P10-201ENST00000403509 664 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 AL390316.1-201ENST00000406279 553 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 GNG5P5-201ENST00000420444 220 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 TPT1P13-201ENST00000449760 499 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 RN7SL738P-201ENST00000470264 297 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 RN7SL346P-201ENST00000491561 294 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 RN7SL441P-201ENST00000492388 296 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 BTF3P13-201ENST00000513224 490 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 IGKV1-32-201ENST00000519290 311 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 AL031320.1-201ENST00000604177 357 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 AC018695.5-201ENST00000605872 315 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 MIR378J-201ENST00000611988 109 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 AC068870.3-201ENST00000625077 2536 ntBASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RPAP1Q9BWH6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 SDAD1P1-202ENST00000524156 2051 ntBASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 AC104333.2-201ENST00000422630 192 ntBASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 VDAC1P6-201ENST00000430062 855 ntBASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 AL354714.3-201ENST00000447284 493 ntBASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 AC093267.1-201ENST00000489176 961 ntBASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 AL512310.9-201ENST00000553311 948 ntBASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 UBE2FP2-201ENST00000566646 462 ntBASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 AC025574.1-201ENST00000554784 1653 ntBASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 AC090220.1-201ENST00000593078 1699 ntBASIC6.11□□□□□ -1.43
RPAP1Q9BWH6 IRF5P1-201ENST00000504852 2164 ntBASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 AC093414.1-201ENST00000434712 514 ntBASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 RPL7P11-201ENST00000437586 658 ntBASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 GSTA7P-201ENST00000438425 448 ntBASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 OR7E125P-201ENST00000443450 846 ntBASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 BTF3P6-201ENST00000448054 499 ntBASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 RN7SL443P-201ENST00000464331 290 ntBASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 AC006349.1-201ENST00000555526 235 ntBASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 AC068790.7-201ENST00000602347 528 ntBASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 AC087283.1-201ENST00000604029 1074 ntBASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 AL034374.2-201ENST00000605281 548 ntBASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 NR1H5P-201ENST00000452683 1377 ntBASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RPAP1Q9BWH6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 SNORA66-201ENST00000384792 133 ntBASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 AL035079.1-201ENST00000405210 287 ntBASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 COX6CP13-201ENST00000428703 226 ntBASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms