Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.52□□□□□ -1.69
H3F3AP84243 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.52□□□□□ -1.69
H3F3AP84243 AC004815.1-201ENST00000484185 331 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 RN7SL244P-201ENST00000493405 297 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.52□□□□□ -1.69
H3F3AP84243 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.52□□□□□ -1.69
H3F3AP84243 AC008638.1-201ENST00000506035 866 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 COX6B1P5-201ENST00000509843 249 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.52□□□□□ -1.69
H3F3AP84243 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.52□□□□□ -1.69
H3F3AP84243 AC006349.1-201ENST00000555526 235 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 MIR3691-201ENST00000578066 90 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.52□□□□□ -1.69
H3F3AP84243 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.52□□□□□ -1.69
H3F3AP84243 AC093799.2-201ENST00000610062 578 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 AC009163.6-201ENST00000612367 342 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 AL627230.1-201ENST00000613077 211 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 AL591926.8-201ENST00000616876 211 ntBASIC4.52□□□□□ -1.69
H3F3AP84243 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.52□□□□□ -1.69
H3F3AP84243 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.52□□□□□ -1.69
H3F3AP84243 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.52□□□□□ -1.69
H3F3AP84243 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3F3AP84243 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.52□□□□□ -1.69
H3F3AP84243 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.51□□□□□ -1.69
H3F3AP84243 AC021242.1-201ENST00000507315 2035 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.51□□□□□ -1.69
H3F3AP84243 AC109780.1-201ENST00000451768 1344 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
H3F3AP84243 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.51□□□□□ -1.69
H3F3AP84243 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.51□□□□□ -1.69
H3F3AP84243 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
H3F3AP84243 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
H3F3AP84243 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.51□□□□□ -1.69
H3F3AP84243 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3AP84243 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.51□□□□□ -1.69
H3F3AP84243 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3AP84243 AL450023.3-201ENST00000440592 271 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 RPL34P20-201ENST00000442771 351 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.51□□□□□ -1.69
H3F3AP84243 OR7E125P-201ENST00000443450 846 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 IGHV5-78-201ENST00000450948 295 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 AC091180.1-201ENST00000462104 372 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 AC074386.1-201ENST00000476560 767 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.51□□□□□ -1.69
H3F3AP84243 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
H3F3AP84243 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.51□□□□□ -1.69
H3F3AP84243 RNA5SP43-201ENST00000516559 110 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3AP84243 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3AP84243 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.51□□□□□ -1.69
H3F3AP84243 OR7E128P-201ENST00000532736 1024 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.51□□□□□ -1.69
H3F3AP84243 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.51□□□□□ -1.69
H3F3AP84243 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3AP84243 NMNAT1P1-201ENST00000554095 876 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3AP84243 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3AP84243 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.51□□□□□ -1.69
H3F3AP84243 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.51□□□□□ -1.69
H3F3AP84243 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.51□□□□□ -1.69
H3F3AP84243 SDR42E1P1-201ENST00000611327 477 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 AP002799.1-201ENST00000623552 423 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.51□□□□□ -1.69
H3F3AP84243 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
H3F3AP84243 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
H3F3AP84243 AC000374.1-201ENST00000434698 1745 ntBASIC4.51□□□□□ -1.69
H3F3AP84243 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
H3F3AP84243 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
H3F3AP84243 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
H3F3AP84243 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.51□□□□□ -1.69
H3F3AP84243 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
H3F3AP84243 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.51□□□□□ -1.69
H3F3AP84243 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
H3F3AP84243 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
H3F3AP84243 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
H3F3AP84243 AL450345.1-202ENST00000605741 3881 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 AC011447.7-201ENST00000624228 1590 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 LINC01355-201ENST00000566551 5444 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 SCN1A-220ENST00000641603 12506 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
H3F3AP84243 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
H3F3AP84243 SPTLC1P2-201ENST00000407089 121 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 RNU2-22P-201ENST00000411266 212 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 RPL23AP27-201ENST00000415161 451 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 BMS1P13-201ENST00000417301 885 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.5□□□□□ -1.69
H3F3AP84243 ARAFP2-201ENST00000440565 559 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 TXNP5-201ENST00000441043 315 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.5□□□□□ -1.69
H3F3AP84243 CYCSP24-201ENST00000445119 316 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
H3F3AP84243 AC073850.1-201ENST00000449243 255 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 MYO5BP2-201ENST00000449815 1277 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 HMGB1P4-201ENST00000455362 567 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms