Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 AP001357.1-201ENST00000586304 1053 ntBASIC4.35□□□□□ -1.71
LMO4P61968 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.35□□□□□ -1.71
LMO4P61968 AL162431.4-201ENST00000604674 411 ntBASIC4.35□□□□□ -1.71
LMO4P61968 AC012213.4-201ENST00000606457 354 ntBASIC4.35□□□□□ -1.71
LMO4P61968 AL592494.3-201ENST00000609485 464 ntBASIC4.35□□□□□ -1.71
LMO4P61968 AL356608.1-201ENST00000610034 820 ntBASIC4.35□□□□□ -1.71
LMO4P61968 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
LMO4P61968 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LMO4P61968 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.35□□□□□ -1.71
LMO4P61968 AL034549.2-201ENST00000618285 3373 ntBASIC4.35□□□□□ -1.71
LMO4P61968 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
LMO4P61968 AC003973.3-201ENST00000624863 2822 ntBASIC4.35□□□□□ -1.71
LMO4P61968 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.71
LMO4P61968 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.34□□□□□ -1.71
LMO4P61968 ZNF402P-201ENST00000404435 3100 ntBASIC4.34□□□□□ -1.71
LMO4P61968 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.34□□□□□ -1.71
LMO4P61968 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.34□□□□□ -1.71
LMO4P61968 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC4.34□□□□□ -1.71
LMO4P61968 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LMO4P61968 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 RNA5SP90-201ENST00000364801 99 ntBASIC4.34□□□□□ -1.71
LMO4P61968 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 OR8V1P-201ENST00000395193 873 ntBASIC4.34□□□□□ -1.71
LMO4P61968 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.34□□□□□ -1.71
LMO4P61968 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.34□□□□□ -1.71
LMO4P61968 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.34□□□□□ -1.71
LMO4P61968 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 MTND4LP7-201ENST00000431728 294 ntBASIC4.34□□□□□ -1.71
LMO4P61968 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.34□□□□□ -1.71
LMO4P61968 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.34□□□□□ -1.71
LMO4P61968 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.34□□□□□ -1.71
LMO4P61968 HIGD1AP8-201ENST00000453927 274 ntBASIC4.34□□□□□ -1.71
LMO4P61968 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 COX6B1P2-201ENST00000489624 230 ntBASIC4.34□□□□□ -1.71
LMO4P61968 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.34□□□□□ -1.71
LMO4P61968 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.34□□□□□ -1.71
LMO4P61968 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.34□□□□□ -1.71
LMO4P61968 AC034244.2-201ENST00000514668 858 ntBASIC4.34□□□□□ -1.71
LMO4P61968 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC4.34□□□□□ -1.71
LMO4P61968 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.34□□□□□ -1.71
LMO4P61968 OR5AZ1P-201ENST00000527448 943 ntBASIC4.34□□□□□ -1.71
LMO4P61968 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.34□□□□□ -1.71
LMO4P61968 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.34□□□□□ -1.71
LMO4P61968 MTND1P24-201ENST00000552175 861 ntBASIC4.34□□□□□ -1.71
LMO4P61968 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.34□□□□□ -1.71
LMO4P61968 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.34□□□□□ -1.71
LMO4P61968 AC011840.5-201ENST00000582125 771 ntBASIC4.34□□□□□ -1.71
LMO4P61968 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LMO4P61968 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC4.34□□□□□ -1.71
LMO4P61968 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 AC005776.1-201ENST00000603164 290 ntBASIC4.34□□□□□ -1.71
LMO4P61968 OR4H6P-202ENST00000603819 340 ntBASIC4.34□□□□□ -1.71
LMO4P61968 AC034236.3-201ENST00000605999 461 ntBASIC4.34□□□□□ -1.71
LMO4P61968 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.34□□□□□ -1.71
LMO4P61968 AC093799.2-201ENST00000610062 578 ntBASIC4.34□□□□□ -1.71
LMO4P61968 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.34□□□□□ -1.71
LMO4P61968 AL138960.1-201ENST00000613838 513 ntBASIC4.34□□□□□ -1.71
LMO4P61968 AC015722.2-201ENST00000622210 551 ntBASIC4.34□□□□□ -1.71
LMO4P61968 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.34□□□□□ -1.71
LMO4P61968 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.34□□□□□ -1.71
LMO4P61968 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LMO4P61968 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.34□□□□□ -1.71
LMO4P61968 MTCO1P4-201ENST00000520516 1409 ntBASIC4.34□□□□□ -1.71
LMO4P61968 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
LMO4P61968 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LMO4P61968 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMO4P61968 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC4.34□□□□□ -1.72
LMO4P61968 AC138907.8-201ENST00000623981 2256 ntBASIC4.34□□□□□ -1.72
LMO4P61968 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LMO4P61968 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LMO4P61968 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.34□□□□□ -1.72
LMO4P61968 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LMO4P61968 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
LMO4P61968 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.34□□□□□ -1.72
LMO4P61968 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
LMO4P61968 AC018628.1-201ENST00000624147 3819 ntBASIC4.33□□□□□ -1.72
LMO4P61968 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.33□□□□□ -1.72
LMO4P61968 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LMO4P61968 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
LMO4P61968 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms