Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AC079600.1-201ENST00000550326 297 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB1P53618 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPB1P53618 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB1P53618 AC127024.5-201ENST00000580085 462 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB1P53618 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB1P53618 AC241377.1-201ENST00000619797 406 ntBASIC5.87□□□□□ -1.47
COPB1P53618 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COPB1P53618 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AC005261.6-201ENST00000623072 1387 ntBASIC5.87□□□□□ -1.47
COPB1P53618 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPB1P53618 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPB1P53618 AC012078.1-201ENST00000405035 1646 ntBASIC5.87□□□□□ -1.47
COPB1P53618 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB1P53618 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB1P53618 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB1P53618 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPB1P53618 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB1P53618 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB1P53618 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPB1P53618 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPB1P53618 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
COPB1P53618 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.86□□□□□ -1.47
COPB1P53618 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.86□□□□□ -1.47
COPB1P53618 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.86□□□□□ -1.47
COPB1P53618 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COPB1P53618 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COPB1P53618 RPL21P67-201ENST00000402896 478 ntBASIC5.86□□□□□ -1.47
COPB1P53618 CHEK2P5-201ENST00000423877 246 ntBASIC5.86□□□□□ -1.47
COPB1P53618 SRSF1P1-201ENST00000424058 520 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AC092447.3-201ENST00000426027 686 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AL512661.1-201ENST00000434586 1253 ntBASIC5.86□□□□□ -1.47
COPB1P53618 RAB9AP5-201ENST00000437794 597 ntBASIC5.86□□□□□ -1.47
COPB1P53618 Z84478.1-201ENST00000438230 1219 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.86□□□□□ -1.47
COPB1P53618 RRM2P4-201ENST00000441721 562 ntBASIC5.86□□□□□ -1.47
COPB1P53618 RAB9AP2-201ENST00000443911 597 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AC006326.1-201ENST00000445465 787 ntBASIC5.86□□□□□ -1.47
COPB1P53618 EEF1B2P6-201ENST00000445713 673 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AL672138.1-201ENST00000450604 1015 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AL445665.1-202ENST00000452436 324 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.86□□□□□ -1.47
COPB1P53618 RN7SL72P-201ENST00000460697 269 ntBASIC5.86□□□□□ -1.47
COPB1P53618 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.86□□□□□ -1.47
COPB1P53618 CBX1P5-201ENST00000475330 559 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AC058823.1-201ENST00000485315 474 ntBASIC5.86□□□□□ -1.47
COPB1P53618 RPL7P41-201ENST00000485823 957 ntBASIC5.86□□□□□ -1.47
COPB1P53618 RN7SL814P-201ENST00000487715 300 ntBASIC5.86□□□□□ -1.47
COPB1P53618 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.86□□□□□ -1.47
COPB1P53618 HMGB1P47-201ENST00000511281 589 ntBASIC5.86□□□□□ -1.47
COPB1P53618 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 Y_RNA.717-201ENST00000517106 92 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AC022360.1-201ENST00000521058 340 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.86□□□□□ -1.47
COPB1P53618 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 RBM22P12-201ENST00000567098 1255 ntBASIC5.86□□□□□ -1.47
COPB1P53618 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 AC016839.1-201ENST00000578162 867 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AC022884.2-201ENST00000578535 580 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.86□□□□□ -1.47
COPB1P53618 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.86□□□□□ -1.47
COPB1P53618 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.86□□□□□ -1.47
COPB1P53618 AP001033.2-201ENST00000609701 1003 ntBASIC5.86□□□□□ -1.47
COPB1P53618 MIR8084-201ENST00000614105 89 ntBASIC5.86□□□□□ -1.47
COPB1P53618 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.86□□□□□ -1.47
COPB1P53618 OR13C1P-202ENST00000641378 2919 ntBASIC5.86□□□□□ -1.47
COPB1P53618 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.86□□□□□ -1.47
COPB1P53618 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.86□□□□□ -1.47
COPB1P53618 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.86□□□□□ -1.47
COPB1P53618 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COPB1P53618 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COPB1P53618 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.85□□□□□ -1.47
COPB1P53618 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPB1P53618 AC015689.2-201ENST00000528172 1738 ntBASIC5.85□□□□□ -1.47
COPB1P53618 SMG1P7-201ENST00000565246 2704 ntBASIC5.85□□□□□ -1.47
COPB1P53618 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.85□□□□□ -1.47
COPB1P53618 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPB1P53618 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.85□□□□□ -1.47
COPB1P53618 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.85□□□□□ -1.47
COPB1P53618 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPB1P53618 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COPB1P53618 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPB1P53618 TMSB4XP4-201ENST00000323496 618 ntBASIC5.85□□□□□ -1.47
COPB1P53618 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COPB1P53618 MIR365B-201ENST00000362317 111 ntBASIC5.85□□□□□ -1.47
COPB1P53618 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COPB1P53618 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPB1P53618 ST13P16-201ENST00000401760 781 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms