Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTSDP07339 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTSDP07339 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTSDP07339 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTSDP07339 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.14□□□□□ -1.75
CTSDP07339 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.14□□□□□ -1.75
CTSDP07339 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.14□□□□□ -1.75
CTSDP07339 AC104687.2-201ENST00000604442 342 ntBASIC4.14□□□□□ -1.75
CTSDP07339 AC087783.2-201ENST00000605070 562 ntBASIC4.14□□□□□ -1.75
CTSDP07339 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.14□□□□□ -1.75
CTSDP07339 AC004477.3-201ENST00000614061 590 ntBASIC4.14□□□□□ -1.75
CTSDP07339 OR8G7P-201ENST00000616658 848 ntBASIC4.14□□□□□ -1.75
CTSDP07339 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CTSDP07339 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CTSDP07339 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.14□□□□□ -1.75
CTSDP07339 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.14□□□□□ -1.75
CTSDP07339 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CTSDP07339 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTSDP07339 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.14□□□□□ -1.75
CTSDP07339 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTSDP07339 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CTSDP07339 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.13□□□□□ -1.75
CTSDP07339 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CTSDP07339 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTSDP07339 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTSDP07339 AC027228.2-201ENST00000567141 2154 ntBASIC4.13□□□□□ -1.75
CTSDP07339 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.13□□□□□ -1.75
CTSDP07339 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CTSDP07339 RNU1-83P-201ENST00000363426 164 ntBASIC4.13□□□□□ -1.75
CTSDP07339 RNA5SP242-201ENST00000364171 118 ntBASIC4.13□□□□□ -1.75
CTSDP07339 RN7SKP124-201ENST00000364730 341 ntBASIC4.13□□□□□ -1.75
CTSDP07339 AL353625.1-202ENST00000366273 571 ntBASIC4.13□□□□□ -1.75
CTSDP07339 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTSDP07339 RNA5SP339-201ENST00000390987 122 ntBASIC4.13□□□□□ -1.75
CTSDP07339 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTSDP07339 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.13□□□□□ -1.75
CTSDP07339 RN7SKP293-201ENST00000411389 296 ntBASIC4.13□□□□□ -1.75
CTSDP07339 FABP7P1-201ENST00000424004 391 ntBASIC4.13□□□□□ -1.75
CTSDP07339 RPS27P18-201ENST00000431701 247 ntBASIC4.13□□□□□ -1.75
CTSDP07339 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.13□□□□□ -1.75
CTSDP07339 AL450263.2-201ENST00000439400 589 ntBASIC4.13□□□□□ -1.75
CTSDP07339 ARL4AP3-201ENST00000441452 574 ntBASIC4.13□□□□□ -1.75
CTSDP07339 Z80107.2-201ENST00000445127 392 ntBASIC4.13□□□□□ -1.75
CTSDP07339 AL645937.3-201ENST00000453647 936 ntBASIC4.13□□□□□ -1.75
CTSDP07339 AC023141.9-201ENST00000458734 412 ntBASIC4.13□□□□□ -1.75
CTSDP07339 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.13□□□□□ -1.75
CTSDP07339 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CTSDP07339 EIF1P7-201ENST00000487533 337 ntBASIC4.13□□□□□ -1.75
CTSDP07339 RN7SL466P-201ENST00000497546 295 ntBASIC4.13□□□□□ -1.75
CTSDP07339 RPS4XP20-201ENST00000505751 772 ntBASIC4.13□□□□□ -1.75
CTSDP07339 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.13□□□□□ -1.75
CTSDP07339 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.13□□□□□ -1.75
CTSDP07339 RNU6-941P-201ENST00000516346 108 ntBASIC4.13□□□□□ -1.75
CTSDP07339 RNA5SP360-201ENST00000516555 118 ntBASIC4.13□□□□□ -1.75
CTSDP07339 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.13□□□□□ -1.75
CTSDP07339 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CTSDP07339 AC084759.1-201ENST00000561168 290 ntBASIC4.13□□□□□ -1.75
CTSDP07339 AC020978.7-201ENST00000575953 1187 ntBASIC4.13□□□□□ -1.75
CTSDP07339 SNORD95-201ENST00000579879 68 ntBASIC4.13□□□□□ -1.75
CTSDP07339 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.13□□□□□ -1.75
CTSDP07339 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.13□□□□□ -1.75
CTSDP07339 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.13□□□□□ -1.75
CTSDP07339 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.13□□□□□ -1.75
CTSDP07339 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.13□□□□□ -1.75
CTSDP07339 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.13□□□□□ -1.75
CTSDP07339 AC010245.2-201ENST00000606908 1167 ntBASIC4.13□□□□□ -1.75
CTSDP07339 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CTSDP07339 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTSDP07339 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.13□□□□□ -1.75
CTSDP07339 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CTSDP07339 AC092435.4-201ENST00000623012 4159 ntBASIC4.13□□□□□ -1.75
CTSDP07339 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTSDP07339 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
CTSDP07339 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.13□□□□□ -1.75
CTSDP07339 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTSDP07339 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.13□□□□□ -1.75
CTSDP07339 MTCO1P22-201ENST00000604619 1360 ntBASIC4.13□□□□□ -1.75
CTSDP07339 OR51H2P-202ENST00000641424 3046 ntBASIC4.13□□□□□ -1.75
CTSDP07339 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
CTSDP07339 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.12□□□□□ -1.75
CTSDP07339 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 PANDAR-201ENST00000629595 1506 ntBASIC4.12□□□□□ -1.75
CTSDP07339 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CTSDP07339 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CTSDP07339 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 RNA5SP435-201ENST00000364044 108 ntBASIC4.12□□□□□ -1.75
CTSDP07339 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.12□□□□□ -1.75
CTSDP07339 SNORA66-201ENST00000384792 133 ntBASIC4.12□□□□□ -1.75
CTSDP07339 ATP5HP3-201ENST00000396994 486 ntBASIC4.12□□□□□ -1.75
CTSDP07339 U3.35-201ENST00000408405 208 ntBASIC4.12□□□□□ -1.75
CTSDP07339 SNORA77-201ENST00000408716 125 ntBASIC4.12□□□□□ -1.75
CTSDP07339 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.12□□□□□ -1.75
CTSDP07339 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.12□□□□□ -1.75
CTSDP07339 RGS17P1-201ENST00000423358 553 ntBASIC4.12□□□□□ -1.75
CTSDP07339 AC093655.2-201ENST00000425735 631 ntBASIC4.12□□□□□ -1.75
CTSDP07339 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms