Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL589994.1-201ENST00000404962 340 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.42□□□□□ -1.54
SMAD6O43541 AL133482.1-201ENST00000415988 498 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.42□□□□□ -1.54
SMAD6O43541 RPS27AP6-201ENST00000427962 448 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.42□□□□□ -1.54
SMAD6O43541 NPM1P18-201ENST00000434232 732 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMAD6O43541 SETP8-201ENST00000435341 628 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.42□□□□□ -1.54
SMAD6O43541 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.42□□□□□ -1.54
SMAD6O43541 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.42□□□□□ -1.54
SMAD6O43541 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.42□□□□□ -1.54
SMAD6O43541 CLIC4P1-201ENST00000453177 535 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AC002553.2-201ENST00000453217 340 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 MTND2P30-201ENST00000456663 382 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 RNU6-599P-201ENST00000459383 107 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 RNU6-1193P-201ENST00000459461 107 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMAD6O43541 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
SMAD6O43541 RN7SL423P-201ENST00000486202 304 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AC021146.5-201ENST00000503544 545 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AC006499.3-201ENST00000506077 748 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.42□□□□□ -1.54
SMAD6O43541 AC111000.6-201ENST00000514471 709 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 SNORA70.17-201ENST00000516449 133 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.42□□□□□ -1.54
SMAD6O43541 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.42□□□□□ -1.54
SMAD6O43541 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.42□□□□□ -1.54
SMAD6O43541 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.42□□□□□ -1.54
SMAD6O43541 HNRNPRP2-201ENST00000528421 743 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AC087888.1-201ENST00000550884 1254 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AC012414.2-201ENST00000559474 187 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AL049838.1-201ENST00000563647 981 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.42□□□□□ -1.54
SMAD6O43541 AC027216.1-201ENST00000577726 685 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AC015911.5-201ENST00000587076 451 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.42□□□□□ -1.54
SMAD6O43541 AC244107.2-201ENST00000611773 76 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMAD6O43541 Z99129.2-201ENST00000619967 314 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMAD6O43541 RNU6-368P-201ENST00000620928 107 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 RNU6-538P-201ENST00000622329 107 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.42□□□□□ -1.54
SMAD6O43541 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.42□□□□□ -1.54
SMAD6O43541 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SMAD6O43541 AC074101.1-201ENST00000637861 241 ntBASIC5.42□□□□□ -1.54
SMAD6O43541 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.42□□□□□ -1.54
SMAD6O43541 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SMAD6O43541 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMAD6O43541 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.42□□□□□ -1.54
SMAD6O43541 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.42□□□□□ -1.54
SMAD6O43541 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.42□□□□□ -1.54
SMAD6O43541 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.42□□□□□ -1.54
SMAD6O43541 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMAD6O43541 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMAD6O43541 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMAD6O43541 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.41□□□□□ -1.54
SMAD6O43541 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SMAD6O43541 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.41□□□□□ -1.54
SMAD6O43541 AC093775.1-201ENST00000624154 1868 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SMAD6O43541 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SMAD6O43541 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
SMAD6O43541 AC092681.1-201ENST00000297369 291 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 RN7SKP74-201ENST00000362849 309 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SMAD6O43541 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SMAD6O43541 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SMAD6O43541 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.41□□□□□ -1.54
SMAD6O43541 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 HSPA8P15-201ENST00000401676 786 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 DUTP5-201ENST00000406790 469 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 SPTLC1P2-201ENST00000407089 121 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 PTGES3P2-201ENST00000407942 482 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.41□□□□□ -1.54
SMAD6O43541 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.41□□□□□ -1.54
SMAD6O43541 AC093655.2-201ENST00000425735 631 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 MTCO1P57-201ENST00000432182 261 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 NDUFA5P1-201ENST00000433858 341 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.41□□□□□ -1.54
SMAD6O43541 AL627308.1-201ENST00000435693 821 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.41□□□□□ -1.54
SMAD6O43541 MYO5BP2-201ENST00000449815 1277 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.41□□□□□ -1.54
SMAD6O43541 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.41□□□□□ -1.54
SMAD6O43541 AC026348.1-201ENST00000462549 1053 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.41□□□□□ -1.54
SMAD6O43541 AC004815.1-201ENST00000484185 331 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.41□□□□□ -1.54
SMAD6O43541 RPL5P23-201ENST00000496040 868 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.41□□□□□ -1.54
SMAD6O43541 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms