Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.69□□□□□ -1.66
UPK1AO00322 BX284632.1-201ENST00000478218 541 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
UPK1AO00322 HMGN2P25-201ENST00000486956 268 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.69□□□□□ -1.66
UPK1AO00322 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.69□□□□□ -1.66
UPK1AO00322 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.69□□□□□ -1.66
UPK1AO00322 RNA5SP92-201ENST00000516437 110 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 RNA5SP34-201ENST00000516887 130 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 AC022832.1-201ENST00000530718 645 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.69□□□□□ -1.66
UPK1AO00322 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.69□□□□□ -1.66
UPK1AO00322 AC090022.1-201ENST00000546569 311 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
UPK1AO00322 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
UPK1AO00322 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1AO00322 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.69□□□□□ -1.66
UPK1AO00322 TAS2R6P-201ENST00000605022 826 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 SNORD91B-202ENST00000608459 222 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.69□□□□□ -1.66
UPK1AO00322 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
UPK1AO00322 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1AO00322 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
UPK1AO00322 MUC2-202ENST00000613187 4845 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 PROS2P-201ENST00000474651 1951 ntBASIC4.69□□□□□ -1.66
UPK1AO00322 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1AO00322 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1AO00322 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1AO00322 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
UPK1AO00322 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.68□□□□□ -1.66
UPK1AO00322 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1AO00322 SNORA70.10-201ENST00000384515 134 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.68□□□□□ -1.66
UPK1AO00322 SETP15-201ENST00000412724 337 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.68□□□□□ -1.66
UPK1AO00322 E2F6P2-201ENST00000420708 748 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.68□□□□□ -1.66
UPK1AO00322 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
UPK1AO00322 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1AO00322 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1AO00322 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.68□□□□□ -1.66
UPK1AO00322 AC090114.3-201ENST00000479267 829 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.68□□□□□ -1.66
UPK1AO00322 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.68□□□□□ -1.66
UPK1AO00322 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
UPK1AO00322 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.68□□□□□ -1.66
UPK1AO00322 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1AO00322 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.68□□□□□ -1.66
UPK1AO00322 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1AO00322 NMNAT1P1-201ENST00000554095 876 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.68□□□□□ -1.66
UPK1AO00322 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.68□□□□□ -1.66
UPK1AO00322 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1AO00322 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.68□□□□□ -1.66
UPK1AO00322 AL627230.1-201ENST00000613077 211 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 AL512624.1-201ENST00000613638 469 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 AL591926.8-201ENST00000616876 211 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 AL122125.1-201ENST00000616999 600 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1AO00322 LINC01739-205ENST00000641890 573 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1AO00322 THAP12P4-201ENST00000528321 2266 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.68□□□□□ -1.66
UPK1AO00322 CASC19-206ENST00000641028 1430 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.68□□□□□ -1.66
UPK1AO00322 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.68□□□□□ -1.66
UPK1AO00322 AC083843.3-201ENST00000623679 2186 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
UPK1AO00322 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1AO00322 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1AO00322 AC093591.2-201ENST00000565254 3843 ntBASIC4.68□□□□□ -1.66
UPK1AO00322 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1AO00322 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1AO00322 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1AO00322 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.67□□□□□ -1.66
UPK1AO00322 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
UPK1AO00322 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1AO00322 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1AO00322 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
UPK1AO00322 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1AO00322 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1AO00322 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.67□□□□□ -1.66
UPK1AO00322 GTF3AP1-201ENST00000416942 1004 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 FABP7P1-201ENST00000424004 391 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 OR7E125P-201ENST00000443450 846 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.67□□□□□ -1.66
UPK1AO00322 NDUFA5P8-201ENST00000449019 346 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 RN7SL727P-201ENST00000482164 296 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 ARL4AP1-201ENST00000503220 705 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.67□□□□□ -1.66
UPK1AO00322 AC011411.1-201ENST00000509592 876 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 COX6B1P5-201ENST00000509843 249 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.67□□□□□ -1.66
UPK1AO00322 RNA5SP43-201ENST00000516559 110 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.67□□□□□ -1.66
UPK1AO00322 OR7E128P-201ENST00000532736 1024 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.67□□□□□ -1.66
UPK1AO00322 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms