Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL133388.1-201ENST00000404509 287 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 RNA5SP296-201ENST00000410523 111 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PKP4Q99569 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.27□□□□□ -1.57
PKP4Q99569 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.27□□□□□ -1.57
PKP4Q99569 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.27□□□□□ -1.57
PKP4Q99569 RPL12P17-201ENST00000432393 498 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 NPM1P18-201ENST00000434232 732 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AL035551.1-201ENST00000446931 348 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.27□□□□□ -1.57
PKP4Q99569 AL672138.1-201ENST00000450604 1015 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.27□□□□□ -1.57
PKP4Q99569 TVP23BP2-201ENST00000455082 615 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AC092754.1-201ENST00000472975 479 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 RN7SL174P-201ENST00000475578 289 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 EIF1P7-201ENST00000487533 337 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AC108729.1-201ENST00000487812 947 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.27□□□□□ -1.57
PKP4Q99569 HMGB1P44-201ENST00000508597 572 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AC025768.1-201ENST00000510057 267 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.27□□□□□ -1.57
PKP4Q99569 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.27□□□□□ -1.57
PKP4Q99569 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.27□□□□□ -1.57
PKP4Q99569 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.27□□□□□ -1.57
PKP4Q99569 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.27□□□□□ -1.57
PKP4Q99569 AP004607.2-201ENST00000533949 322 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AC134349.2-201ENST00000535136 910 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PKP4Q99569 AC087888.1-201ENST00000550884 1254 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 BLZF2P-201ENST00000553776 1130 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AL390334.1-201ENST00000556395 450 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.27□□□□□ -1.57
PKP4Q99569 AC012414.2-201ENST00000559474 187 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.27□□□□□ -1.57
PKP4Q99569 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.27□□□□□ -1.57
PKP4Q99569 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.27□□□□□ -1.57
PKP4Q99569 AC108738.1-201ENST00000603703 237 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AC010632.3-201ENST00000611377 369 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AC104763.3-201ENST00000613765 618 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PKP4Q99569 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PKP4Q99569 MIR8080-201ENST00000622224 89 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AL049777.1-201ENST00000622740 518 ntBASIC5.27□□□□□ -1.57
PKP4Q99569 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.27□□□□□ -1.57
PKP4Q99569 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PKP4Q99569 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.27□□□□□ -1.57
PKP4Q99569 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.27□□□□□ -1.57
PKP4Q99569 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PKP4Q99569 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PKP4Q99569 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PKP4Q99569 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PKP4Q99569 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PKP4Q99569 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PKP4Q99569 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PKP4Q99569 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
PKP4Q99569 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PKP4Q99569 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PKP4Q99569 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
PKP4Q99569 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PKP4Q99569 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PKP4Q99569 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PKP4Q99569 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PKP4Q99569 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PKP4Q99569 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PKP4Q99569 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PKP4Q99569 MIR133B-201ENST00000362210 119 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PKP4Q99569 MT-TP-201ENST00000387461 68 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 AL512422.1-201ENST00000407033 553 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.26□□□□□ -1.57
PKP4Q99569 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PKP4Q99569 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.26□□□□□ -1.57
PKP4Q99569 NAP1L4P2-201ENST00000425958 899 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.26□□□□□ -1.57
PKP4Q99569 RPS27AP6-201ENST00000427962 448 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 AC046176.1-201ENST00000435260 1170 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 AL691517.1-201ENST00000440833 1235 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 AL591623.2-201ENST00000449978 222 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.26□□□□□ -1.57
PKP4Q99569 AL035090.1-201ENST00000454835 332 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PKP4Q99569 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.26□□□□□ -1.57
PKP4Q99569 FCF1P6-201ENST00000456841 595 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.26□□□□□ -1.57
PKP4Q99569 RN7SL184P-201ENST00000488308 297 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 RN7SL547P-201ENST00000490793 290 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.26□□□□□ -1.57
PKP4Q99569 AC010460.2-201ENST00000509054 677 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.26□□□□□ -1.57
PKP4Q99569 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.26□□□□□ -1.57
PKP4Q99569 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.26□□□□□ -1.57
PKP4Q99569 RNA5SP362-201ENST00000516048 118 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 AC138701.1-201ENST00000524329 714 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 OR4A43P-201ENST00000532938 908 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.26□□□□□ -1.57
PKP4Q99569 AC023158.1-201ENST00000561632 1025 ntBASIC5.26□□□□□ -1.57
PKP4Q99569 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PKP4Q99569 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PKP4Q99569 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.26□□□□□ -1.57
PKP4Q99569 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms