Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO3Q8TAP4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO3Q8TAP4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO3Q8TAP4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LMO3Q8TAP4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO3Q8TAP4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LMO3Q8TAP4 MTCO1P11-201ENST00000429111 1528 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 SNURFL-201ENST00000309296 343 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 RN7SKP269-201ENST00000365545 319 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 RNU6-891P-201ENST00000384280 111 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 MIR223-201ENST00000385204 110 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 LRRC37BP1-201ENST00000398851 714 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AC007738.1-201ENST00000413892 348 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 OR51A6P-201ENST00000418680 1004 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 TCEA1P1-201ENST00000449716 880 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AL353718.1-201ENST00000451028 517 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AC098826.2-201ENST00000452011 651 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AL691482.1-201ENST00000453255 87 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AC090114.3-201ENST00000479267 829 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 RN7SL30P-201ENST00000488416 306 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 HIGD1AP14-201ENST00000507617 282 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AC105031.1-201ENST00000518550 476 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 HNRNPRP2-201ENST00000528421 743 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AGGF1P9-201ENST00000561884 913 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AC010503.3-201ENST00000594355 540 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AC135803.1-201ENST00000608748 565 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AL049777.1-201ENST00000622740 518 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 AC020763.5-201ENST00000623298 430 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.43□□□□□ -1.54
LMO3Q8TAP4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.43□□□□□ -1.54
LMO3Q8TAP4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 OR51C1P-202ENST00000641159 1444 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 AC211486.3-201ENST00000412694 621 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 DDX39BP1-205ENST00000422507 192 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 MRPL35P2-201ENST00000448009 511 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 AL356981.1-201ENST00000454879 684 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 AC091180.1-201ENST00000462104 372 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 AC010350.1-201ENST00000504908 231 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 MTND3P24-201ENST00000506306 329 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 RNA5SP92-201ENST00000516437 110 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 AC138701.1-201ENST00000524329 714 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 AC090022.1-201ENST00000546569 311 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 AC011840.5-201ENST00000582125 771 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 TAS2R6P-201ENST00000605022 826 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 AC063976.2-201ENST00000425667 3556 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO3Q8TAP4 MTCO1P22-201ENST00000604619 1360 ntBASIC5.42□□□□□ -1.54
LMO3Q8TAP4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMO3Q8TAP4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMO3Q8TAP4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms