Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NPM1P42-201ENST00000560329 862 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AP001357.1-201ENST00000586304 1053 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AL583832.1-201ENST00000603227 784 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC090527.3-201ENST00000619041 548 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC010435.1-201ENST00000623353 1177 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 CYP4F35P-202ENST00000636121 390 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC018809.2-201ENST00000602436 3823 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AL359715.3-201ENST00000569267 2123 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 PROS2P-201ENST00000474651 1951 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 OR55B1P-203ENST00000641518 2602 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 SNORA17.1-201ENST00000362945 126 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 RNU6-1320P-201ENST00000390838 107 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 RNU6-1269P-201ENST00000391139 107 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AL353692.2-201ENST00000407054 335 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 RAB28P1-201ENST00000411517 641 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AC006065.1-201ENST00000422539 802 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 VN1R21P-201ENST00000426703 765 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 RPS3AP38-201ENST00000435889 763 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AC093716.1-201ENST00000435923 377 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AC073648.4-201ENST00000442655 781 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 MEMO1P4-201ENST00000453590 386 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 RNU6-599P-201ENST00000459383 107 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 RNU6-1193P-201ENST00000459461 107 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 snoU109.5-201ENST00000516231 132 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 RN7SKP147-201ENST00000517154 244 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 OR5AZ1P-201ENST00000527448 943 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AC093014.1-201ENST00000548926 724 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 uc_338.18-201ENST00000615451 175 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AC253576.2-201ENST00000618815 580 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 RNU6-368P-201ENST00000620928 107 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 RNU6-538P-201ENST00000622329 107 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AL391262.2-201ENST00000622466 494 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AC007342.7-201ENST00000624610 2337 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 AC093671.1-201ENST00000624981 2929 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 PANDAR-201ENST00000629595 1506 ntBASIC5.94□□□□□ -1.46
HERC6Q8IVU3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
HERC6Q8IVU3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC239868.2-201ENST00000564237 4527 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC003973.3-201ENST00000624863 2822 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 RNU6-31P-201ENST00000384388 108 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AL009179.1-201ENST00000406085 265 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 CRIP1P1-201ENST00000427567 185 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AL360081.1-201ENST00000428299 555 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 USP24P1-201ENST00000433802 779 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms