Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 TET1P1-201ENST00000426627 2301 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 DDX18P6-201ENST00000450119 1997 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 RN7SKP74-201ENST00000362849 309 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 RNU6-249P-201ENST00000363016 102 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 RNA5SP223-201ENST00000365174 120 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 AL050305.1-201ENST00000399993 1230 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 SNORA81-201ENST00000408493 178 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 GJA6P-201ENST00000415117 1042 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 AC006455.6-201ENST00000426192 893 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 NFYAP1-201ENST00000431953 972 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 RHOT1P3-201ENST00000436571 331 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 RPL34P20-201ENST00000442771 351 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 snoU13.20-201ENST00000459180 104 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 HMGN2P25-201ENST00000486956 268 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 OR8A2P-201ENST00000528631 952 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 AP005432.2-201ENST00000608162 586 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 AC132825.8-201ENST00000640783 297 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 AC104623.2-202ENST00000623477 4002 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 THAP12P4-201ENST00000528321 2266 ntBASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
RFWD3Q6PCD5 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AC006210.2-201ENST00000367074 1545 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 GNG5P5-201ENST00000420444 220 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AL590762.4-201ENST00000425885 253 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AC244033.1-201ENST00000426826 870 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 RPL34P6-201ENST00000432390 345 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 RPL7P61-201ENST00000451721 751 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AC097173.1-201ENST00000505862 819 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AC015849.6-201ENST00000605454 474 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AC024940.4-201ENST00000605507 246 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AL627230.1-201ENST00000613077 211 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AL591926.8-201ENST00000616876 211 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AC002044.3-201ENST00000623314 541 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AC112198.2-201ENST00000426589 6996 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 AP001642.1-201ENST00000624727 2117 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 SCARNA15-201ENST00000607520 4325 ntBASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.29□□□□□ -1.56
RFWD3Q6PCD5 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 NXF4-202ENST00000416098 1465 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms