Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
CLRN1P58418 MT-RNR2-201ENST00000387347 1559 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 OR56B2P-201ENST00000317102 954 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 RNU6-666P-201ENST00000363499 107 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CLRN1P58418 RNU6-1263P-201ENST00000384601 106 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 FABP12P1-201ENST00000401911 322 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AL121978.1-201ENST00000402778 359 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 RN7SKP146-201ENST00000410242 334 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 MTND4LP17-201ENST00000414607 293 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.48□□□□□ -1.53
CLRN1P58418 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 AL139421.1-201ENST00000423010 169 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.48□□□□□ -1.53
CLRN1P58418 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.48□□□□□ -1.53
CLRN1P58418 PSMD10P2-201ENST00000432890 672 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 DEFA9P-201ENST00000433042 285 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 AC129850.1-201ENST00000436203 508 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC013403.1-201ENST00000436954 263 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 MTCYBP3-201ENST00000445588 1137 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AL606662.1-201ENST00000445763 553 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 RPL21P134-201ENST00000453468 483 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC021205.1-201ENST00000468797 348 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AL355032.1-201ENST00000472981 438 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC073610.1-201ENST00000489971 396 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 MTND6P8-201ENST00000503471 522 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 AC090958.1-201ENST00000511122 351 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC010625.1-201ENST00000511296 403 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 MTND3P5-201ENST00000512798 333 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.48□□□□□ -1.53
CLRN1P58418 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 OR6M2P-201ENST00000529831 871 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 OR4A6P-201ENST00000534364 970 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AL391156.1-201ENST00000554965 554 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 ACTR3BP3-201ENST00000565577 979 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 MT1CP-201ENST00000567054 174 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 MIR744-201ENST00000578242 98 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.48□□□□□ -1.53
CLRN1P58418 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.48□□□□□ -1.53
CLRN1P58418 AL031985.2-201ENST00000600955 480 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC006539.2-201ENST00000601729 572 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC080078.2-201ENST00000603766 501 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AL591167.1-201ENST00000607321 456 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.48□□□□□ -1.53
CLRN1P58418 AC073114.1-201ENST00000612027 490 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC121761.2-201ENST00000617300 689 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 MIR6823-201ENST00000622118 61 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 MIR4278-201ENST00000636094 69 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CLRN1P58418 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CLRN1P58418 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CLRN1P58418 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 AC011503.2-201ENST00000594230 1500 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.48□□□□□ -1.53
CLRN1P58418 GTF2H2B-203ENST00000508065 1432 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 SSXP3-201ENST00000442971 1300 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AC024587.1-201ENST00000505925 2157 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 AKAP17BP-201ENST00000431706 2719 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.47□□□□□ -1.53
CLRN1P58418 AC068769.1-201ENST00000474767 2426 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.47□□□□□ -1.53
CLRN1P58418 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 ZNF658B-201ENST00000602828 3408 ntBASIC5.47□□□□□ -1.53
CLRN1P58418 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.47□□□□□ -1.53
CLRN1P58418 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CLRN1P58418 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.47□□□□□ -1.53
CLRN1P58418 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLRN1P58418 RNU4-75P-201ENST00000364621 146 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 268.3 ms