Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.67□□□□□ -1.34
MRE11P49959 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.67□□□□□ -1.34
MRE11P49959 SNORD125-201ENST00000459538 96 ntBASIC6.67□□□□□ -1.34
MRE11P49959 AC011476.1-201ENST00000466725 307 ntBASIC6.67□□□□□ -1.34
MRE11P49959 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MRE11P49959 TRBV8-1-201ENST00000481590 279 ntBASIC6.67□□□□□ -1.34
MRE11P49959 SUMO2P5-201ENST00000506790 245 ntBASIC6.67□□□□□ -1.34
MRE11P49959 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.67□□□□□ -1.34
MRE11P49959 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MRE11P49959 RNU6-513P-201ENST00000516104 104 ntBASIC6.67□□□□□ -1.34
MRE11P49959 Y_RNA.710-201ENST00000516975 110 ntBASIC6.67□□□□□ -1.34
MRE11P49959 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.67□□□□□ -1.34
MRE11P49959 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.67□□□□□ -1.34
MRE11P49959 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MRE11P49959 RPL3P13-201ENST00000550415 216 ntBASIC6.67□□□□□ -1.34
MRE11P49959 OR4U1P-201ENST00000554958 912 ntBASIC6.67□□□□□ -1.34
MRE11P49959 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.67□□□□□ -1.34
MRE11P49959 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.67□□□□□ -1.34
MRE11P49959 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.67□□□□□ -1.34
MRE11P49959 AC027281.1-201ENST00000574178 758 ntBASIC6.67□□□□□ -1.34
MRE11P49959 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.67□□□□□ -1.34
MRE11P49959 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.67□□□□□ -1.34
MRE11P49959 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.67□□□□□ -1.34
MRE11P49959 MIMT1-201ENST00000597105 1050 ntBASIC6.67□□□□□ -1.34
MRE11P49959 AL606834.3-201ENST00000602615 496 ntBASIC6.67□□□□□ -1.34
MRE11P49959 AC069304.3-201ENST00000603938 1084 ntBASIC6.67□□□□□ -1.34
MRE11P49959 NANOGP3-201ENST00000605855 286 ntBASIC6.67□□□□□ -1.34
MRE11P49959 AC124016.2-201ENST00000610058 665 ntBASIC6.67□□□□□ -1.34
MRE11P49959 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.67□□□□□ -1.34
MRE11P49959 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.67□□□□□ -1.34
MRE11P49959 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.67□□□□□ -1.34
MRE11P49959 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.67□□□□□ -1.34
MRE11P49959 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.67□□□□□ -1.34
MRE11P49959 AC027279.1-201ENST00000568885 4284 ntBASIC6.67□□□□□ -1.34
MRE11P49959 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MRE11P49959 AC006206.1-201ENST00000544842 3387 ntBASIC6.67□□□□□ -1.34
MRE11P49959 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MRE11P49959 AC093909.5-201ENST00000621839 1799 ntBASIC6.67□□□□□ -1.34
MRE11P49959 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MRE11P49959 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MRE11P49959 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
MRE11P49959 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
MRE11P49959 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.66□□□□□ -1.34
MRE11P49959 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.66□□□□□ -1.34
MRE11P49959 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.66□□□□□ -1.34
MRE11P49959 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.66□□□□□ -1.34
MRE11P49959 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.66□□□□□ -1.34
MRE11P49959 AC026951.1-201ENST00000559530 2459 ntBASIC6.66□□□□□ -1.34
MRE11P49959 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
MRE11P49959 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
MRE11P49959 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
MRE11P49959 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
MRE11P49959 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
MRE11P49959 RNA5SP211-201ENST00000365516 117 ntBASIC6.66□□□□□ -1.34
MRE11P49959 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
MRE11P49959 AL096711.1-201ENST00000404780 554 ntBASIC6.66□□□□□ -1.34
MRE11P49959 ZNF602P-201ENST00000405929 924 ntBASIC6.66□□□□□ -1.34
MRE11P49959 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.66□□□□□ -1.34
MRE11P49959 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.66□□□□□ -1.34
MRE11P49959 TXNL1P1-201ENST00000429528 554 ntBASIC6.66□□□□□ -1.34
MRE11P49959 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.66□□□□□ -1.34
MRE11P49959 AP000281.1-201ENST00000444036 316 ntBASIC6.66□□□□□ -1.34
MRE11P49959 RPL7P33-201ENST00000444159 742 ntBASIC6.66□□□□□ -1.34
MRE11P49959 LINC02210-201ENST00000444561 288 ntBASIC6.66□□□□□ -1.34
MRE11P49959 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.66□□□□□ -1.34
MRE11P49959 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
MRE11P49959 NDUFA5P9-201ENST00000472609 340 ntBASIC6.66□□□□□ -1.34
MRE11P49959 AC087672.1-201ENST00000479876 766 ntBASIC6.66□□□□□ -1.34
MRE11P49959 AC121161.1-201ENST00000510606 652 ntBASIC6.66□□□□□ -1.34
MRE11P49959 MIR2117-201ENST00000516780 80 ntBASIC6.66□□□□□ -1.34
MRE11P49959 IGLV3-24-201ENST00000517477 197 ntBASIC6.66□□□□□ -1.34
MRE11P49959 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.66□□□□□ -1.34
MRE11P49959 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.66□□□□□ -1.34
MRE11P49959 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
MRE11P49959 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.66□□□□□ -1.34
MRE11P49959 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.66□□□□□ -1.34
MRE11P49959 AC110760.3-201ENST00000598794 467 ntBASIC6.66□□□□□ -1.34
MRE11P49959 GAS5-AS1-201ENST00000602767 694 ntBASIC6.66□□□□□ -1.34
MRE11P49959 AC104785.1-201ENST00000603220 588 ntBASIC6.66□□□□□ -1.34
MRE11P49959 AC092954.1-201ENST00000609121 445 ntBASIC6.66□□□□□ -1.34
MRE11P49959 AL139124.1-201ENST00000609123 421 ntBASIC6.66□□□□□ -1.34
MRE11P49959 AP005229.2-201ENST00000609980 697 ntBASIC6.66□□□□□ -1.34
MRE11P49959 AL035661.1-201ENST00000620459 1144 ntBASIC6.66□□□□□ -1.34
MRE11P49959 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.66□□□□□ -1.34
MRE11P49959 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
MRE11P49959 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.66□□□□□ -1.34
MRE11P49959 AL513185.3-201ENST00000433335 1300 ntBASIC6.66□□□□□ -1.34
MRE11P49959 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MRE11P49959 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
MRE11P49959 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
MRE11P49959 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
MRE11P49959 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
MRE11P49959 C4BPAP1-201ENST00000415474 1893 ntBASIC6.66□□□□□ -1.34
MRE11P49959 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
MRE11P49959 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.66□□□□□ -1.34
MRE11P49959 MFSD8-220ENST00000641243 1422 ntBASIC6.66□□□□□ -1.34
MRE11P49959 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MRE11P49959 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
MRE11P49959 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
MRE11P49959 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms