Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL138960.1-201ENST00000613838 513 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 AC245389.2-201ENST00000616023 576 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 AC242843.1-201ENST00000618702 573 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 MIR6830-201ENST00000636015 70 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CXCL12P48061 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL12P48061 MFSD8-220ENST00000641243 1422 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL12P48061 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL12P48061 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CXCL12P48061 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.03□□□□□ -1.6
CXCL12P48061 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL12P48061 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CXCL12P48061 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.02□□□□□ -1.61
CXCL12P48061 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL12P48061 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL12P48061 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.02□□□□□ -1.61
CXCL12P48061 AC090018.1-201ENST00000434369 367 ntBASIC5.02□□□□□ -1.61
CXCL12P48061 AC073143.1-201ENST00000436316 395 ntBASIC5.02□□□□□ -1.61
CXCL12P48061 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.02□□□□□ -1.61
CXCL12P48061 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL12P48061 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.02□□□□□ -1.61
CXCL12P48061 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.02□□□□□ -1.61
CXCL12P48061 RN7SKP122-201ENST00000515923 296 ntBASIC5.02□□□□□ -1.61
CXCL12P48061 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.02□□□□□ -1.61
CXCL12P48061 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CXCL12P48061 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL12P48061 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL12P48061 AC108738.1-201ENST00000603703 237 ntBASIC5.02□□□□□ -1.61
CXCL12P48061 AC098935.2-201ENST00000604222 466 ntBASIC5.02□□□□□ -1.61
CXCL12P48061 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.02□□□□□ -1.61
CXCL12P48061 AC015712.7-201ENST00000615211 635 ntBASIC5.02□□□□□ -1.61
CXCL12P48061 AL031658.2-201ENST00000616850 651 ntBASIC5.02□□□□□ -1.61
CXCL12P48061 MIR6853-201ENST00000619642 74 ntBASIC5.02□□□□□ -1.61
CXCL12P48061 AC068831.8-201ENST00000620171 435 ntBASIC5.02□□□□□ -1.61
CXCL12P48061 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL12P48061 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL12P48061 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL12P48061 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.02□□□□□ -1.61
CXCL12P48061 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.02□□□□□ -1.61
CXCL12P48061 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CXCL12P48061 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CXCL12P48061 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.01□□□□□ -1.61
CXCL12P48061 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL12P48061 AC006206.1-201ENST00000544842 3387 ntBASIC5.01□□□□□ -1.61
CXCL12P48061 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL12P48061 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL12P48061 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CXCL12P48061 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL12P48061 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL12P48061 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
CXCL12P48061 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL12P48061 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.01□□□□□ -1.61
CXCL12P48061 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL12P48061 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CXCL12P48061 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.01□□□□□ -1.61
CXCL12P48061 SNORA2.3-201ENST00000383920 135 ntBASIC5.01□□□□□ -1.61
CXCL12P48061 RN7SKP27-201ENST00000410684 333 ntBASIC5.01□□□□□ -1.61
CXCL12P48061 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.01□□□□□ -1.61
CXCL12P48061 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.01□□□□□ -1.61
CXCL12P48061 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL12P48061 BNIP3P5-201ENST00000562290 498 ntBASIC5.01□□□□□ -1.61
CXCL12P48061 MIR4433B-201ENST00000581329 102 ntBASIC5.01□□□□□ -1.61
CXCL12P48061 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.01□□□□□ -1.61
CXCL12P48061 AP001267.4-201ENST00000602598 545 ntBASIC5.01□□□□□ -1.61
CXCL12P48061 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.01□□□□□ -1.61
CXCL12P48061 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CXCL12P48061 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.01□□□□□ -1.61
CXCL12P48061 AC139713.2-214ENST00000642059 1811 ntBASIC5.01□□□□□ -1.61
CXCL12P48061 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.01□□□□□ -1.61
CXCL12P48061 AC006210.2-201ENST00000367074 1545 ntBASIC5.01□□□□□ -1.61
CXCL12P48061 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CXCL12P48061 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.01□□□□□ -1.61
CXCL12P48061 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CXCL12P48061 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CXCL12P48061 MUC2-202ENST00000613187 4845 ntBASIC5□□□□□ -1.61
CXCL12P48061 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CXCL12P48061 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CXCL12P48061 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL12P48061 AC010928.1-201ENST00000592477 1447 ntBASIC5□□□□□ -1.61
CXCL12P48061 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5□□□□□ -1.61
CXCL12P48061 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CXCL12P48061 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5□□□□□ -1.61
CXCL12P48061 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5□□□□□ -1.61
CXCL12P48061 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
CXCL12P48061 RNA5SP223-201ENST00000365174 120 ntBASIC5□□□□□ -1.61
CXCL12P48061 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5□□□□□ -1.61
CXCL12P48061 U3.22-201ENST00000391120 215 ntBASIC5□□□□□ -1.61
CXCL12P48061 NPM1P38-201ENST00000403835 865 ntBASIC5□□□□□ -1.61
CXCL12P48061 SNORA77-201ENST00000408716 125 ntBASIC5□□□□□ -1.61
CXCL12P48061 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5□□□□□ -1.61
CXCL12P48061 AC007064.3-201ENST00000422608 359 ntBASIC5□□□□□ -1.61
CXCL12P48061 CHIAP3-201ENST00000423668 1133 ntBASIC5□□□□□ -1.61
CXCL12P48061 GTF2IP2-201ENST00000424290 697 ntBASIC5□□□□□ -1.61
CXCL12P48061 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5□□□□□ -1.61
CXCL12P48061 ARL2BPP10-201ENST00000446487 531 ntBASIC5□□□□□ -1.61
CXCL12P48061 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5□□□□□ -1.61
CXCL12P48061 AC010733.1-201ENST00000451515 401 ntBASIC5□□□□□ -1.61
CXCL12P48061 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CXCL12P48061 PPIAP21-201ENST00000464473 501 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms