Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb2S4R1M3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb2S4R1M3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb2S4R1M3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb2S4R1M3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb2S4R1M3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb2S4R1M3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb2S4R1M3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb2S4R1M3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
H2afb2S4R1M3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb2S4R1M3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb2S4R1M3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2afb2S4R1M3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2afb2S4R1M3 Haglr-201ENSMUST00000100000 2085 ntBASIC16.77■□□□□ 0.27
H2afb2S4R1M3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.77■□□□□ 0.27
H2afb2S4R1M3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
H2afb2S4R1M3 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
H2afb2S4R1M3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb2S4R1M3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb2S4R1M3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Gm2274-201ENSMUST00000184539 609 ntBASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms