Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
H2afb3S4R1G7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.08■□□□□ 0.01
H2afb3S4R1G7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
H2afb3S4R1G7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
H2afb3S4R1G7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.08■□□□□ 0.01
H2afb3S4R1G7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
H2afb3S4R1G7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb3S4R1G7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb3S4R1G7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb3S4R1G7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb3S4R1G7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.08■□□□□ 0
H2afb3S4R1G7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb3S4R1G7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.08■□□□□ 0
H2afb3S4R1G7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb3S4R1G7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb3S4R1G7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
H2afb3S4R1G7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
H2afb3S4R1G7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
H2afb3S4R1G7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 Gm13216-201ENSMUST00000117145 591 ntBASIC15.07■□□□□ 0
H2afb3S4R1G7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.07■□□□□ 0
H2afb3S4R1G7 Gm17661-201ENSMUST00000170317 270 ntBASIC15.07■□□□□ 0
H2afb3S4R1G7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.07■□□□□ 0
H2afb3S4R1G7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2afb3S4R1G7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.07■□□□□ 0
H2afb3S4R1G7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.06■□□□□ 0
H2afb3S4R1G7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.06■□□□□ 0
H2afb3S4R1G7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.06■□□□□ 0
H2afb3S4R1G7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
H2afb3S4R1G7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
H2afb3S4R1G7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.06■□□□□ 0
H2afb3S4R1G7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2afb3S4R1G7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
H2afb3S4R1G7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
H2afb3S4R1G7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
H2afb3S4R1G7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.05■□□□□ 0
H2afb3S4R1G7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
H2afb3S4R1G7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
H2afb3S4R1G7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
H2afb3S4R1G7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.05■□□□□ -0
H2afb3S4R1G7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
H2afb3S4R1G7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.05■□□□□ -0
H2afb3S4R1G7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.05■□□□□ -0
H2afb3S4R1G7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.05■□□□□ -0
H2afb3S4R1G7 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.05■□□□□ -0
H2afb3S4R1G7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb3S4R1G7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
H2afb3S4R1G7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
H2afb3S4R1G7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.04■□□□□ -0
H2afb3S4R1G7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms