Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lgr5Q9Z1P4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lgr5Q9Z1P4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Gm18206-201ENSMUST00000207027 926 ntBASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lgr5Q9Z1P4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lgr5Q9Z1P4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lgr5Q9Z1P4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.02■□□□□ 0.8
Lgr5Q9Z1P4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lgr5Q9Z1P4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lgr5Q9Z1P4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.02■□□□□ 0.8
Lgr5Q9Z1P4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Lgr5Q9Z1P4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.02■□□□□ 0.8
Lgr5Q9Z1P4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.02■□□□□ 0.8
Lgr5Q9Z1P4 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.02■□□□□ 0.8
Lgr5Q9Z1P4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lgr5Q9Z1P4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lgr5Q9Z1P4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.02■□□□□ 0.79
Lgr5Q9Z1P4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lgr5Q9Z1P4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lgr5Q9Z1P4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lgr5Q9Z1P4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lgr5Q9Z1P4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Gm12350-201ENSMUST00000121208 462 ntBASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Gm1401-201ENSMUST00000122048 772 ntBASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Lgr5Q9Z1P4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20■□□□□ 0.79
Lgr5Q9Z1P4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Gm25745-201ENSMUST00000174945 133 ntBASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Gm7506-201ENSMUST00000207758 815 ntBASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lgr5Q9Z1P4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms