Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cldn3Q9Z0G9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 Mir5130-201ENSMUST00000175160 84 ntBASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn3Q9Z0G9 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.96■□□□□ 0.3
Cldn3Q9Z0G9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Gm45058-201ENSMUST00000205810 766 ntBASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn3Q9Z0G9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn3Q9Z0G9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn3Q9Z0G9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms