Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
ClcnkaQ9WUB7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ClcnkaQ9WUB7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ClcnkaQ9WUB7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClcnkaQ9WUB7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Mir6982-201ENSMUST00000184354 68 ntBASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms