Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Gm2651-201ENSMUST00000203560 838 ntBASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.23□□□□□ -0.13
Col13a1Q9R1N9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.22□□□□□ -0.13
Col13a1Q9R1N9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Actl10-202ENSMUST00000226583 1501 ntBASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Gm37025-201ENSMUST00000195159 829 ntBASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col13a1Q9R1N9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col13a1Q9R1N9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col13a1Q9R1N9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms