Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Gm7370-201ENSMUST00000219471 767 ntBASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps35Q9EQH3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps35Q9EQH3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps35Q9EQH3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps35Q9EQH3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps35Q9EQH3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps35Q9EQH3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.77■□□□□ 0.28
Vps35Q9EQH3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.77■□□□□ 0.28
Vps35Q9EQH3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.77■□□□□ 0.28
Vps35Q9EQH3 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.77■□□□□ 0.28
Vps35Q9EQH3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps35Q9EQH3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps35Q9EQH3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps35Q9EQH3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps35Q9EQH3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Vps35Q9EQH3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Vps35Q9EQH3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps35Q9EQH3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps35Q9EQH3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vps35Q9EQH3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Gm18958-201ENSMUST00000174258 762 ntBASIC16.76■□□□□ 0.27
Vps35Q9EQH3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Mir5130-201ENSMUST00000175160 84 ntBASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.76■□□□□ 0.27
Vps35Q9EQH3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps35Q9EQH3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Gm13836-201ENSMUST00000121159 501 ntBASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Gm10231-201ENSMUST00000181584 441 ntBASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Gm10175-202ENSMUST00000208752 441 ntBASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps35Q9EQH3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps35Q9EQH3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms