Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Gm18958-201ENSMUST00000174258 762 ntBASIC17.5■□□□□ 0.39
Cpne8Q9DC53 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.5■□□□□ 0.39
Cpne8Q9DC53 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne8Q9DC53 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne8Q9DC53 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne8Q9DC53 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne8Q9DC53 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Gm5417-201ENSMUST00000079706 384 ntBASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne8Q9DC53 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms