Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 AW822252-206ENSMUST00000208904 237 ntBASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rrp8Q9DB85 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rrp8Q9DB85 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rrp8Q9DB85 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.36■□□□□ 0.21
Rrp8Q9DB85 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Rps4l-201ENSMUST00000071745 943 ntBASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rrp8Q9DB85 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms