Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC21.02■□□□□ 0.95
Chmp5Q9D7S9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Gm12382-201ENSMUST00000122005 922 ntBASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp5Q9D7S9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Chmp5Q9D7S9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21■□□□□ 0.95
Chmp5Q9D7S9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp5Q9D7S9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Gm27275-201ENSMUST00000184318 272 ntBASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp5Q9D7S9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp5Q9D7S9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp5Q9D7S9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms