Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Mtag2-201ENSMUST00000058665 714 ntBASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nop56Q9D6Z1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nop56Q9D6Z1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nop56Q9D6Z1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nop56Q9D6Z1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nop56Q9D6Z1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nop56Q9D6Z1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.33■□□□□ 0.37
Nop56Q9D6Z1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nop56Q9D6Z1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Gm18284-201ENSMUST00000172604 624 ntBASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nop56Q9D6Z1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nop56Q9D6Z1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Mir6349-201ENSMUST00000184059 97 ntBASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Rab3c-203ENSMUST00000224180 967 ntBASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop56Q9D6Z1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop56Q9D6Z1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop56Q9D6Z1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop56Q9D6Z1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop56Q9D6Z1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.29■□□□□ 0.36
Nop56Q9D6Z1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop56Q9D6Z1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop56Q9D6Z1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop56Q9D6Z1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop56Q9D6Z1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop56Q9D6Z1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms