Protein–RNA interactions for Protein: Q9D6J1

Cers4, Ceramide synthase 4, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cers4Q9D6J1 Gm2274-201ENSMUST00000184539 609 ntBASIC15.43■□□□□ 0.06
Cers4Q9D6J1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cers4Q9D6J1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cers4Q9D6J1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cers4Q9D6J1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cers4Q9D6J1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cers4Q9D6J1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cers4Q9D6J1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cers4Q9D6J1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cers4Q9D6J1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.43■□□□□ 0.06
Cers4Q9D6J1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cers4Q9D6J1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Cers4Q9D6J1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cers4Q9D6J1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Gm11539-201ENSMUST00000119837 557 ntBASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Gm13436-201ENSMUST00000120418 567 ntBASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Gm10252-201ENSMUST00000209541 832 ntBASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cers4Q9D6J1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cers4Q9D6J1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.39■□□□□ 0.05
Cers4Q9D6J1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.39■□□□□ 0.05
Cers4Q9D6J1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cers4Q9D6J1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.39■□□□□ 0.05
Cers4Q9D6J1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cers4Q9D6J1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cers4Q9D6J1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cers4Q9D6J1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cers4Q9D6J1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms