Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.93■□□□□ 0.78
Stag1Q9D3E6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Stag1Q9D3E6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 Gm27459-201ENSMUST00000184860 107 ntBASIC19.91■□□□□ 0.78
Stag1Q9D3E6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Stag1Q9D3E6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Stag1Q9D3E6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.78
Stag1Q9D3E6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Stag1Q9D3E6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Stag1Q9D3E6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.88■□□□□ 0.77
Stag1Q9D3E6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms