Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp48Q9D361 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp48Q9D361 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Gm7889-201ENSMUST00000185591 958 ntBASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Gm18959-201ENSMUST00000208954 655 ntBASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.72■□□□□ 0.27
Snrnp48Q9D361 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Gm13186-201ENSMUST00000118031 316 ntBASIC16.71■□□□□ 0.27
Snrnp48Q9D361 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Mir1668-201ENSMUST00000184114 107 ntBASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp48Q9D361 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Snrnp48Q9D361 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Snrnp48Q9D361 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Mir5130-201ENSMUST00000175160 84 ntBASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Actl10-202ENSMUST00000226583 1501 ntBASIC16.7■□□□□ 0.26
Snrnp48Q9D361 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Gm13216-201ENSMUST00000117145 591 ntBASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp48Q9D361 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms