Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc43Q9CR29 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc43Q9CR29 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Timm23-208ENSMUST00000226683 750 ntBASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc43Q9CR29 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc43Q9CR29 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Gm715-201ENSMUST00000117865 831 ntBASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.61■□□□□ 0.57
Ccdc43Q9CR29 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc43Q9CR29 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms