Protein–RNA interactions for Protein: Q9CPW5

Ssr2, Translocon-associated protein subunit beta, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr2Q9CPW5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Gm13474-201ENSMUST00000122466 815 ntBASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ssr2Q9CPW5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Gm7370-201ENSMUST00000219471 767 ntBASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr2Q9CPW5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.02■□□□□ 0.16
Ssr2Q9CPW5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ssr2Q9CPW5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ssr2Q9CPW5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr2Q9CPW5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr2Q9CPW5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.02■□□□□ 0.16
Ssr2Q9CPW5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr2Q9CPW5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ssr2Q9CPW5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.02■□□□□ 0.16
Ssr2Q9CPW5 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.02■□□□□ 0.16
Ssr2Q9CPW5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr2Q9CPW5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr2Q9CPW5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr2Q9CPW5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr2Q9CPW5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr2Q9CPW5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.02■□□□□ 0.15
Ssr2Q9CPW5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr2Q9CPW5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr2Q9CPW5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Ssr2Q9CPW5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Gm18959-201ENSMUST00000208954 655 ntBASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr2Q9CPW5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms