Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.42■□□□□ 0.22
Trim16Q99PP9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim16Q99PP9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim16Q99PP9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim16Q99PP9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.4■□□□□ 0.22
Trim16Q99PP9 Timm23-208ENSMUST00000226683 750 ntBASIC16.4■□□□□ 0.22
Trim16Q99PP9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim16Q99PP9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Trim16Q99PP9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Trim16Q99PP9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Gm24841-201ENSMUST00000158676 357 ntBASIC16.39■□□□□ 0.21
Trim16Q99PP9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Gm21814-202ENSMUST00000203277 873 ntBASIC16.39■□□□□ 0.21
Trim16Q99PP9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.39■□□□□ 0.21
Trim16Q99PP9 Odf3b-204ENSMUST00000227834 930 ntBASIC16.39■□□□□ 0.21
Trim16Q99PP9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms