Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 AA414768-201ENSMUST00000121924 1257 ntBASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Gm7977-201ENSMUST00000193787 748 ntBASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tpgs1Q99MS8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Tpgs1Q99MS8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tpgs1Q99MS8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpgs1Q99MS8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpgs1Q99MS8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpgs1Q99MS8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpgs1Q99MS8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms