Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SncaipQ99ME3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SncaipQ99ME3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.32■□□□□ 0.36
SncaipQ99ME3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Gm6433-201ENSMUST00000118634 875 ntBASIC17.32■□□□□ 0.36
SncaipQ99ME3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Gm2274-201ENSMUST00000184539 609 ntBASIC17.32■□□□□ 0.36
SncaipQ99ME3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.32■□□□□ 0.36
SncaipQ99ME3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SncaipQ99ME3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SncaipQ99ME3 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.32■□□□□ 0.36
SncaipQ99ME3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.31■□□□□ 0.36
SncaipQ99ME3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SncaipQ99ME3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaipQ99ME3 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.3■□□□□ 0.36
SncaipQ99ME3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SncaipQ99ME3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.3■□□□□ 0.36
SncaipQ99ME3 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.3■□□□□ 0.36
SncaipQ99ME3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaipQ99ME3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SncaipQ99ME3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SncaipQ99ME3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.28■□□□□ 0.36
SncaipQ99ME3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SncaipQ99ME3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SncaipQ99ME3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.28■□□□□ 0.36
SncaipQ99ME3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SncaipQ99ME3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms