Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Rarb-207ENSMUST00000225921 2756 ntBASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Gm11779-201ENSMUST00000118541 368 ntBASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Gm29707-201ENSMUST00000196325 491 ntBASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-1Q99MA9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Gm6736-201ENSMUST00000166583 948 ntBASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-1Q99MA9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Gm44450-201ENSMUST00000199528 114 ntBASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Gm18421-201ENSMUST00000204122 625 ntBASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-1Q99MA9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms